School of Life Science, Beijing Institute of Technology, Beijing 100081, PR China.
China General Microbiological Culture Collection Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
Int J Syst Evol Microbiol. 2014 Aug;64(Pt 8):2700-2705. doi: 10.1099/ijs.0.055426-0. Epub 2014 May 22.
A Gram-staining-positive bacterium, designated strain XN13(T), was isolated from a soil sample collected from ALaShan National Geological Park in Inner Mongolia Autonomous Region, China and subjected to a taxonomic study using a polyphasic approach. Strain XN13(T) was found to have a range of chemical and morphological properties consistent with its classification in the genus Planomicrobium. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain XN13(T) was related to members of the genus Planomicrobium. The closest phylogenetic relatives were Planomicrobium okeanokoites NBRC 12536(T), Planomicrobium koreense JG07(T), Planomicrobium mcmeekinii S23F2(T) and Planomicrobium flavidum ISL-41(T) with 98.2%, 97.8%, 97.8% and 97.7% 16S rRNA gene sequence similarity, respectively. The major cellular fatty acids were anteiso-C(15 : 0), C(16 : 1)ω7c alcohol, iso-C(14 : 0) and C(16 : 1)ω11c. The predominant menaquinones were MK-8 and MK-7. The DNA G+C content was 40.3 mol%. The DNA-DNA relatedness values between strain XN13(T) and Planomicrobium okeanokoites KCTC 3672(T), Planomicrobium koreense KCTC 3684(T), P. mcmeekinii CGMCC 1.2724(T), Planomicrobium flavidum KCTC 13261(T), Planomicrobium chinense CGMCC 1.3454(T) and Planomicrobium glaciei CGMCC 1.6846(T) were 36%, 30%, 34%, 29%, 30% and 31%, respectively. The organism is different from recognized species of the genus Planomicrobium in several phenotypic characteristics. On the basis of phenotypic and genotypic properties, strain XN13(T) represents a novel species of the genus Planomicrobium, for which the name Planomicrobium soli sp. nov. is proposed. The type strain is XN13(T) ( = CGMCC 1.12259(T) = KCTC 33047(T)).
一株革兰氏阳性细菌,命名为 XN13(T) 菌株,从中国内蒙古自治区阿拉善国家地质公园的土壤样本中分离出来,并采用多相分类法进行了分类学研究。XN13(T) 菌株的化学和形态特征与它在 Planomicrobium 属中的分类一致。基于 16S rRNA 基因序列的系统发育分析表明,菌株 XN13(T)与 Planomicrobium 属的成员有关。最接近的系统发育亲缘关系是 Planomicrobium okeanokoites NBRC 12536(T)、Planomicrobium koreense JG07(T)、Planomicrobium mcmeekinii S23F2(T)和 Planomicrobium flavidum ISL-41(T),它们的 16S rRNA 基因序列相似度分别为 98.2%、97.8%、97.8%和 97.7%。主要的细胞脂肪酸为 anteiso-C(15:0)、C(16:1)ω7c 醇、iso-C(14:0)和 C(16:1)ω11c。主要的menaquinones 是 MK-8 和 MK-7。DNA G+C 含量为 40.3 mol%。XN13(T)菌株与 Planomicrobium okeanokoites KCTC 3672(T)、Planomicrobium koreense KCTC 3684(T)、P. mcmeekinii CGMCC 1.2724(T)、Planomicrobium flavidum KCTC 13261(T)、Planomicrobium chinense CGMCC 1.3454(T)和 Planomicrobium glaciei CGMCC 1.6846(T)之间的 DNA-DNA 相关性分别为 36%、30%、34%、29%、30%和 31%。该菌与已确认的 Planomicrobium 属的种在几个表型特征上存在差异。基于表型和基因型特征,菌株 XN13(T)代表了 Planomicrobium 属的一个新种,提议将其命名为 Planomicrobium soli sp. nov.。模式菌株为 XN13(T)(=CGMCC 1.12259(T)=KCTC 33047(T))。