Department of Chemical Engineering, Pusan National University, Busan, South Korea.
Microb Cell Fact. 2014 May 16;13:68. doi: 10.1186/1475-2859-13-68.
Inclusion bodies (IBs) were generally considered to be inactive protein deposits and did not hold any attractive values in biotechnological applications. Recently, some IBs of recombinant proteins were confirmed to show their functional properties such as enzyme activities, fluorescence, etc. Such biologically active IBs are not commonly formed, but they have great potentials in the fields of biocatalysis, material science and nanotechnology.
In this study, we characterized the IBs of DL4, a deletion variant of green fluorescent protein which forms active intracellular aggregates. The DL4 proteins expressed in Escherichia coli were exclusively deposited to IBs, and the IBs were estimated to be mostly composed of active proteins. The spectral properties and quantum yield of the DL4 variant in the active IBs were almost same with those of its native protein. Refolding and stability studies revealed that the deletion mutation in DL4 didn't affect the folding efficiency of the protein, but destabilized its structure. Analyses specific for amyloid-like structures informed that the inner architecture of DL4 IBs might be amorphous rather than well-organized. The diameter of fluorescent DL4 IBs could be decreased up to 100-200 nm by reducing the expression time of the protein in vivo.
To our knowledge, DL4 is the first GFP variant that folds correctly but aggregates exclusively in vivo without any self-aggregating/assembling tags. The fluorescent DL4 IBs have potentials to be used as fluorescent biomaterials. This study also suggests that biologically active IBs can be achieved through engineering a target protein itself.
包涵体(IBs)通常被认为是无活性的蛋白质沉积物,在生物技术应用中没有任何有吸引力的价值。最近,一些重组蛋白的包涵体被证实具有酶活性、荧光等功能特性。这种具有生物活性的包涵体并不常见,但它们在生物催化、材料科学和纳米技术等领域具有巨大的潜力。
在这项研究中,我们对 DL4 的包涵体进行了表征,DL4 是绿色荧光蛋白的一种缺失变体,它形成了活性的细胞内聚集体。在大肠杆菌中表达的 DL4 蛋白都被沉积到包涵体中,并且这些包涵体估计主要由活性蛋白组成。活性包涵体中 DL4 变体的光谱特性和量子产率与天然蛋白几乎相同。复性和稳定性研究表明,DL4 中的缺失突变并没有影响蛋白质的折叠效率,但使蛋白质的结构不稳定。针对淀粉样结构的分析表明,DL4 包涵体的内部结构可能是无定形的,而不是有组织的。通过减少体内表达蛋白的时间,可以将荧光 DL4 包涵体的直径减小到 100-200nm。
据我们所知,DL4 是第一个正确折叠但在体内仅通过自身聚合/组装标签进行特异性聚集的 GFP 变体。荧光 DL4 包涵体有可能被用作荧光生物材料。本研究还表明,通过对目标蛋白本身进行工程改造,可以获得具有生物活性的包涵体。