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在原核生物中检测到大规模且可逆的 B-DNA 到 A-DNA 构象转变,以响应干燥。

Detection of an en masse and reversible B- to A-DNA conformational transition in prokaryotes in response to desiccation.

机构信息

Centre for Biospectroscopy, School of Chemistry, Monash University, Victoria 3800, Australia.

Department of Microbiology, School of Biomedical Sciences, Monash University, Victoria 3800, Australia.

出版信息

J R Soc Interface. 2014 Aug 6;11(97):20140454. doi: 10.1098/rsif.2014.0454.

Abstract

The role that DNA conformation plays in the biochemistry of cells has been the subject of intensive research since DNA polymorphism was discovered. B-DNA has long been considered the native form of DNA in cells although alternative conformations of DNA are thought to occur transiently and along short tracts. Here, we report the first direct observation of a fully reversible en masse conformational transition between B- and A-DNA within live bacterial cells using Fourier transform infrared (FTIR) spectroscopy. This biospectroscopic technique allows for non-invasive and reagent-free examination of the holistic biochemistry of samples. For this reason, we have been able to observe the previously unknown conformational transition in all four species of bacteria investigated. Detection of this transition is evidence of a previously unexplored biological significance for A-DNA and highlights the need for new research into the role that A-DNA plays as a cellular defence mechanism and in stabilizing the DNA conformation. Such studies are pivotal in understanding the role of A-DNA in the evolutionary pathway of nucleic acids. Furthermore, this discovery demonstrates the exquisite capabilities of FTIR spectroscopy and opens the door for further investigations of cell biochemistry with this under-used technique.

摘要

自 DNA 多态性被发现以来,DNA 构象在细胞生物化学中的作用一直是密集研究的主题。尽管人们认为 DNA 存在其他构象,但 B-DNA 长期以来一直被认为是细胞中 DNA 的天然形式,这些构象可能是短暂的,并且只发生在短链上。在这里,我们使用傅里叶变换红外(FTIR)光谱首次直接观察到活细菌细胞内 B-DNA 和 A-DNA 之间的完全可逆的整体构象转变。这种生物光谱技术允许对样品的整体生物化学进行非侵入性和无试剂的检查。因此,我们能够观察到在所有四种研究的细菌中以前未知的构象转变。检测到这种转变证明了 A-DNA 以前未被探索的生物学意义,并强调了需要对 A-DNA 作为细胞防御机制以及稳定 DNA 构象的作用进行新的研究。这些研究对于理解 A-DNA 在核酸进化途径中的作用至关重要。此外,这一发现展示了傅里叶变换红外光谱的精湛能力,并为进一步利用这种未充分利用的技术研究细胞生物化学开辟了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/222a/4208382/c9775fe67e5d/rsif20140454-g1.jpg

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