Suppr超能文献

1902年白符跳(Folsomia candida Willem)(昆虫纲:弹尾目)虫体长度自动测量新方法。

New method for automatic body length measurement of the collembolan, Folsomia candida Willem 1902 (Insecta: Collembola).

作者信息

Bánszegi Oxána, Kosztolányi András, Bakonyi Gábor, Szabó Borbála, Dombos Miklós

机构信息

Institute for Soil Sciences and Agricultural Chemistry, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary.

MTA-DE "Lendület" Behavioural Ecology Research Group, Department of Evolutionary Zoology and Human Biology, University of Debrecen, Debrecen, Hungary.

出版信息

PLoS One. 2014 Jun 5;9(6):e98230. doi: 10.1371/journal.pone.0098230. eCollection 2014.

Abstract

The collembolan, Folsomia candida, is widely used in soil ecotoxicology. In recent years, growth rate of collembolans has become as frequently used endpoint as reproduction rate in ecotoxicological studies. However, measuring collembolan body sizes to estimate growth rate is a complicated and time-consuming task. Here we present a new image analysis method, which facilitates and accelerates the body length measurement of the collembolan Folsomia candida. The new software package, called CollScope, consists of three elements: 1) an imaging device; 2) photographing software; 3) an ImageJ macro for image processing, measurement and data analysis. We give a complete description of the operation of the software, the image analyzing process and describe its accuracy and reliability. The software with a detailed usage manual is attached as Supplementary Material. We report a case study to demonstrate that the automated measurement of collembolan body sizes is highly correlated with the traditional manual measurements (estimated measuring accuracy 0.05 mm). Furthermore, we performed a dose-response ecotoxicity test using cadmium-sulfate by using CollScope as well as classical methods for size measurement. Size data measured by CollScope or manually did not differ significantly. Furthermore the new software package decreased time consumption of the measurements to 42% when tested on 35 animals. Consequently, methodological investigations performed in this study should be regarded as a recommendation for any other routine dose-response study where body growth is an endpoint.

摘要

弹尾虫,白色符氏虫(Folsomia candida),在土壤生态毒理学中被广泛应用。近年来,在生态毒理学研究中,弹尾虫的生长速率已成为与繁殖速率同样常用的终点指标。然而,通过测量弹尾虫的体型大小来估算生长速率是一项复杂且耗时的任务。在此,我们提出一种新的图像分析方法,该方法有助于并加快了对白色符氏虫体型长度的测量。这个名为CollScope的新软件包由三个部分组成:1)成像设备;2)拍摄软件;3)用于图像处理、测量和数据分析的ImageJ宏程序。我们对该软件的操作、图像分析过程进行了完整描述,并阐述了其准确性和可靠性。附有详细使用手册的该软件作为补充材料提供。我们报告了一个案例研究,以证明弹尾虫体型大小的自动测量与传统手动测量高度相关(估计测量精度为0.05毫米)。此外,我们使用CollScope以及传统的尺寸测量方法,用硫酸镉进行了剂量-反应生态毒性试验。通过CollScope或手动测量得到的尺寸数据没有显著差异。此外,在对35只动物进行测试时,新软件包将测量的时间消耗减少到了42%。因此,本研究中进行的方法学研究应被视为对任何以身体生长为终点指标的其他常规剂量-反应研究的一项建议。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/252d/4046991/2b39092d3b7a/pone.0098230.g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验