Yomo Dynamical Microscale Reaction Environment Project, Exploratory Research for Advanced Technology (ERATO), Japan Science and Technology Agency, Osaka, Japan.
1] Yomo Dynamical Microscale Reaction Environment Project, Exploratory Research for Advanced Technology (ERATO), Japan Science and Technology Agency, Osaka, Japan. [2] Department of Biotechnology, Graduate School of Engineering, Osaka University, Osaka, Japan.
Nat Protoc. 2014 Jul;9(7):1578-91. doi: 10.1038/nprot.2014.107. Epub 2014 Jun 5.
Liposome display is a novel method for in vitro selection and directed evolution of membrane proteins. In this approach, membrane proteins of interest are displayed on liposome membranes through translation from a single DNA molecule by using an encapsulated cell-free translation system. The liposomes are probed with a fluorescence indicator that senses membrane protein activity and selected using a fluorescence-activated cell sorting (FACS) instrument. Consequently, DNA encoding a protein with a desired function can be obtained. By implementing this protocol, researchers can process a DNA library of 10(7) different mutants. A single round of the selection procedure requires 24 h for completion, and multiple iterations of this technique, which take 1-5 weeks, enable the isolation of a desired gene. As this protocol is conducted entirely in vitro, it enables the engineering of various proteins, including pore-forming proteins, transporters and receptors. As a useful example of the approach, here we detail a procedure for the in vitro evolution of α-hemolysin from Staphylococcus aureus for its pore-forming activity.
脂质体展示是一种用于体外选择和定向进化膜蛋白的新方法。在这种方法中,通过使用包封的无细胞翻译系统从单个 DNA 分子翻译,将感兴趣的膜蛋白展示在脂质体膜上。用荧光指示剂探测脂质体,该指示剂可以感知膜蛋白的活性,并使用荧光激活细胞分选(FACS)仪器进行选择。因此,可以获得具有所需功能的蛋白质的编码 DNA。通过实施该方案,研究人员可以处理 10(7)个不同突变体的 DNA 文库。选择过程的单个循环需要 24 小时才能完成,并且该技术的多次迭代(需要 1-5 周)可以分离出所需的基因。由于该方案完全在体外进行,因此可以对各种蛋白质(包括孔形成蛋白、转运蛋白和受体)进行工程改造。作为该方法的一个有用示例,我们在这里详细介绍了用于体外进化金黄色葡萄球菌α-溶血素的方法,以提高其孔形成活性。