Bernhardt Harold S, Patrick Wayne M
Department of Biochemistry, University of Otago, PO Box 56, Dunedin, 9054, New Zealand,
J Mol Evol. 2014 Jun;78(6):307-9. doi: 10.1007/s00239-014-9627-y. Epub 2014 Jun 12.
We propose that glycine was the first amino acid to be incorporated into the genetic code, followed by serine, aspartic and/or glutamic acid-small hydrophilic amino acids that all have codons in the bottom right-hand corner of the standard genetic code table. Because primordial ribosomal synthesis is presumed to have been rudimentary, this stage would have been characterized by the synthesis of short, water-soluble peptides, the first of which would have comprised polyglycine. Evolution of the code is proposed to have occurred by the duplication and mutation of tRNA sequences, which produced a radiation of codon assignment outwards from the bottom right-hand corner. As a result of this expansion, we propose a trend from small hydrophilic to hydrophobic amino acids, with selection for longer polypeptides requiring a hydrophobic core for folding and stability driving the incorporation of hydrophobic amino acids into the code.
我们提出,甘氨酸是第一个被纳入遗传密码的氨基酸,其次是丝氨酸、天冬氨酸和/或谷氨酸——这些都是小的亲水性氨基酸,在标准遗传密码表的右下角都有密码子。由于推测原始核糖体合成是初级的,这个阶段的特征将是短的水溶性肽的合成,其中第一个可能是聚甘氨酸。遗传密码的进化被认为是通过tRNA序列的复制和突变发生的,这导致了密码子分配从右下角向外辐射。作为这种扩展的结果,我们提出了从小的亲水性氨基酸到疏水性氨基酸的趋势,对更长多肽的选择需要一个疏水性核心来进行折叠和维持稳定性,这推动了疏水性氨基酸被纳入遗传密码。