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The legumin gene family: structure and evolutionary implications of Vicia faba B-type genes and pseudogenes.

作者信息

Heim U, Schubert R, Bäumlein H, Wobus U

机构信息

Akademie der Wissenschaften der DDR, Zentralinstitut für Genetik und Kulturpflanzenforschung, Gatersleben.

出版信息

Plant Mol Biol. 1989 Dec;13(6):653-63. doi: 10.1007/BF00016020.

DOI:10.1007/BF00016020
PMID:2491681
Abstract

We have characterized several Vicia faba genes encoding methionine residue-free group B subunits of the 11S or legumin storage proteins. The respective gene subfamily consists of 10 to 15 members, six of them having been studied by DNA sequence analysis. Four functional genes (LeB2, LeB4, LeB6, LeB7) are highly homologous in their coding region and 0.3 kb of their 3' flanking sequences. On the other hand, two pseudogenes (psi LeB1, psi LeB5) have accumulated a large number of mutations including an identical 0.7 kb internal deletion; they are both flanked by a repetitive element. Analysis of sequence changes show that transitions are nearly double as frequent as transversions. CpG is the most infrequent dinucleotide whereas TpA is significantly underrepresented in exon sequences. End points of deletions are correlated with short direct repeats and preferentially found in the two introns. Our studies indicate that the Vicia faba legumin B gene subfamily contains a group of expressed, highly homologous genes as well as more diverged pseudogenes.

摘要

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本文引用的文献

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Developmental biochemistry of cottonseed embryogenesis and germination XVIII cDNA and amino acid sequences of members of the storage protein families.棉籽胚胎发生和萌发的发育生物化学 XVIII 贮藏蛋白家族成员的 cDNA 和氨基酸序列。
Plant Mol Biol. 1986 Nov;7(6):475-89. doi: 10.1007/BF00020331.
2
Two soybean ribulose-1,5-bisphosphate carboxylase small subunit genes share extensive homology even in distant flanking sequences.两个大豆核酮糖-1,5-二磷酸羧化酶小亚基基因在远距离侧翼序列中都具有广泛的同源性。
Plant Mol Biol. 1986 Nov;7(6):451-65. doi: 10.1007/BF00020329.
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Molecular cloning, genomic organization, expression and evolution of 12S seed storage protein genes of Arabidopsis thaliana.
蚕豆豆科球蛋白:在发育中的子叶中的积累、纯化、mRNA 特征和编码基因的染色体定位。
Theor Appl Genet. 1991 Nov;83(1):17-23. doi: 10.1007/BF00229221.
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Polymorphism of legumin subunits from field bean (Vicia faba L. var. minor) and its relation to the corresponding multigene family.菜豆属 Legumin 亚基的多态性及其与相应的多基因家族的关系。
Theor Appl Genet. 1993 Aug;86(7):867-74. doi: 10.1007/BF00212614.
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Construction of a quinoa (Chenopodium quinoa Willd.) BAC library and its use in identifying genes encoding seed storage proteins.藜麦(Chenopodium quinoa Willd.)细菌人工染色体文库的构建及其在鉴定种子贮藏蛋白编码基因中的应用。
Theor Appl Genet. 2006 May;112(8):1593-600. doi: 10.1007/s00122-006-0266-6. Epub 2006 Apr 4.
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Development of a composite map in Vicia faba, breeding applications and future prospects.蚕豆复合图谱的构建、育种应用及未来展望
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7
Molecular-cytogenetic characterization of the Vicia faba genome--heterochromatin differentiation, replication patterns and sequence localization.蚕豆基因组的分子细胞遗传学特征——异染色质分化、复制模式及序列定位
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