• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在温度骤降引起的生长动力学动态变化过程中,大肠杆菌O157∶H7 Sakai的全基因组反应

Global genome response of Escherichia coli O157∶H7 Sakai during dynamic changes in growth kinetics induced by an abrupt temperature downshift.

作者信息

King Thea, Kocharunchitt Chawalit, Gobius Kari, Bowman John P, Ross Tom

机构信息

Commonwealth Scientific and Industrial Research Organisation, Animal, Food and Health Sciences, North Ryde, New South Wales, Australia.

Food Safety Centre, Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, Australia.

出版信息

PLoS One. 2014 Jun 13;9(6):e99627. doi: 10.1371/journal.pone.0099627. eCollection 2014.

DOI:10.1371/journal.pone.0099627
PMID:24926786
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4057180/
Abstract

Escherichia coli O157∶H7 is a mesophilic food-borne pathogen. We investigated the growth kinetics of E. coli O157∶H7 Sakai during an abrupt temperature downshift from 35°C to either 20°C, 17°C, 14°C or 10°C; as well as the molecular mechanisms enabling growth after cold stress upon an abrupt downshift from 35°C to 14°C in an integrated transcriptomic and proteomic analysis. All downshifts caused a lag period of growth before growth resumed at a rate typical of the post-shift temperature. Lag and generation time increased with the magnitude of the shift or with the final temperature, while relative lag time displayed little variation across the test range. Analysis of time-dependent molecular changes revealed, in keeping with a decreased growth rate at lower temperature, repression of genes and proteins involved in DNA replication, protein synthesis and carbohydrate catabolism. Consistent with cold-induced remodelling of the bacterial cell envelope, alterations occurred in the expression of genes and proteins involved in transport and binding. The RpoS regulon exhibited sustained induction confirming its importance in adaptation and growth at 14°C. The RpoE regulon was transiently induced, indicating a potential role for this extracytoplasmic stress response system in the early phase of low temperature adaptation during lag phase. Interestingly, genes previously reported to be amongst the most highly up-regulated under oxidative stress were consistently down-regulated. This comprehensive analysis provides insight into the molecular mechanisms operating during adaptation of E. coli to growth at low temperature and is relevant to its physiological state during chilling in foods, such as carcasses.

摘要

大肠杆菌O157∶H7是一种嗜温性食源性病原体。我们研究了大肠杆菌O157∶H7阪崎株在温度从35°C突然降至20°C、17°C、14°C或10°C时的生长动力学;以及在转录组学和蛋白质组学综合分析中,该菌株从35°C突然降至14°C后冷应激下实现生长的分子机制。所有降温都会导致生长出现滞后期,之后生长以转移后温度的典型速率恢复。滞后期和代时随温度降幅或最终温度的升高而增加,而相对滞时在测试范围内变化不大。对随时间变化的分子变化的分析表明,与较低温度下生长速率降低一致,参与DNA复制、蛋白质合成和碳水化合物分解代谢的基因和蛋白质受到抑制。与细菌细胞膜的冷诱导重塑一致,参与转运和结合的基因和蛋白质的表达发生了改变。RpoS调节子表现出持续诱导,证实了其在14°C适应和生长中的重要性。RpoE调节子被短暂诱导,表明这种胞外应激反应系统在滞后期低温适应的早期阶段可能发挥作用。有趣的是,先前报道在氧化应激下上调程度最高的基因一直被下调。这项全面分析深入了解了大肠杆菌在适应低温生长过程中起作用的分子机制,并且与肉类等食品冷藏期间其生理状态相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/d5049742f768/pone.0099627.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/b87a89369272/pone.0099627.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/91a8f1d7e7f2/pone.0099627.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/d5049742f768/pone.0099627.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/b87a89369272/pone.0099627.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/91a8f1d7e7f2/pone.0099627.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b35b/4057180/d5049742f768/pone.0099627.g003.jpg

相似文献

1
Global genome response of Escherichia coli O157∶H7 Sakai during dynamic changes in growth kinetics induced by an abrupt temperature downshift.在温度骤降引起的生长动力学动态变化过程中,大肠杆菌O157∶H7 Sakai的全基因组反应
PLoS One. 2014 Jun 13;9(6):e99627. doi: 10.1371/journal.pone.0099627. eCollection 2014.
2
Physiological Response of Escherichia coli O157:H7 Sakai to Dynamic Changes in Temperature and Water Activity as Experienced during Carcass Chilling.大肠杆菌O157:H7阪崎株对胴体冷却过程中温度和水分活度动态变化的生理反应
Mol Cell Proteomics. 2016 Nov;15(11):3331-3347. doi: 10.1074/mcp.M116.063065. Epub 2016 Sep 11.
3
Global genome response of Escherichia coli O157∶H7 Sakai during dynamic changes in growth kinetics induced by an abrupt downshift in water activity.在水分活度突然下降引起的生长动力学动态变化过程中,大肠杆菌O157∶H7 Sakai的全基因组反应
PLoS One. 2014 Mar 3;9(3):e90422. doi: 10.1371/journal.pone.0090422. eCollection 2014.
4
Integrated transcriptomic and proteomic analysis of the physiological response of Escherichia coli O157:H7 Sakai to steady-state conditions of cold and water activity stress.对大肠杆菌 O157:H7 阪崎菌株在低温和水分活度胁迫的稳态条件下生理反应的转录组和蛋白质组综合分析。
Mol Cell Proteomics. 2012 Jan;11(1):M111.009019. doi: 10.1074/mcp.M111.009019. Epub 2011 Oct 18.
5
Examination of stress and virulence gene expression in Escherichia coli O157:H7 using targeted microarray analysis.利用靶向微阵列分析检测大肠杆菌O157:H7中的应激和毒力基因表达
Foodborne Pathog Dis. 2008 Aug;5(4):437-47. doi: 10.1089/fpd.2008.0100.
6
Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933.RpoS对致病性大肠杆菌O157:H7菌株EDL933基因表达的全局影响。
BMC Genomics. 2009 Aug 3;10:349. doi: 10.1186/1471-2164-10-349.
7
Transcriptomic response of Escherichia coli O157 isolates on meat: Comparison between a typical Australian isolate from cattle and a pathogenic clinical isolate.大肠杆菌 O157 分离株在肉类上的转录组反应:来自牛的典型澳大利亚分离株与致病性临床分离株的比较。
Food Microbiol. 2019 Sep;82:378-387. doi: 10.1016/j.fm.2019.03.008. Epub 2019 Mar 8.
8
Inactivation of alternative sigma factor 54 (RpoN) leads to increased acid resistance, and alters locus of enterocyte effacement (LEE) expression in Escherichia coli O157 : H7.抑制替代 sigma 因子 54(RpoN)会导致大肠杆菌 O157:H7 的酸抗性增强,并改变肠上皮细胞 effacement(LEE)表达的位置。
Microbiology (Reading). 2010 Mar;156(Pt 3):719-730. doi: 10.1099/mic.0.032631-0. Epub 2009 Nov 26.
9
Stress Resistance Development and Genome-Wide Transcriptional Response of Escherichia coli O157:H7 Adapted to Sublethal Thymol, Carvacrol, and -Cinnamaldehyde.适应亚致死浓度麝香草酚、香芹酚和肉桂醛的大肠杆菌 O157:H7 的应激抗性发展和全基因组转录反应。
Appl Environ Microbiol. 2018 Oct 30;84(22). doi: 10.1128/AEM.01616-18. Print 2018 Nov 15.
10
Characterization of the Escherichia coli O157:H7 Sakai GadE regulon.大肠杆菌O157:H7阪崎株GadE调控子的特性分析
J Bacteriol. 2009 Mar;191(6):1868-77. doi: 10.1128/JB.01481-08. Epub 2008 Dec 29.

引用本文的文献

1
Engineering a Dynamic Controllable Infectivity Switch in Bacteriophage T7.工程化噬菌体 T7 中具有动态可控感染性的开关。
ACS Synth Biol. 2022 Jan 21;11(1):286-296. doi: 10.1021/acssynbio.1c00414. Epub 2022 Jan 5.
2
Physiological Response of Escherichia coli O157:H7 Sakai to Dynamic Changes in Temperature and Water Activity as Experienced during Carcass Chilling.大肠杆菌O157:H7阪崎株对胴体冷却过程中温度和水分活度动态变化的生理反应
Mol Cell Proteomics. 2016 Nov;15(11):3331-3347. doi: 10.1074/mcp.M116.063065. Epub 2016 Sep 11.
3
Whole-Transcriptome Analysis of Verocytotoxigenic Escherichia coli O157:H7 (Sakai) Suggests Plant-Species-Specific Metabolic Responses on Exposure to Spinach and Lettuce Extracts.

本文引用的文献

1
Global genome response of Escherichia coli O157∶H7 Sakai during dynamic changes in growth kinetics induced by an abrupt downshift in water activity.在水分活度突然下降引起的生长动力学动态变化过程中,大肠杆菌O157∶H7 Sakai的全基因组反应
PLoS One. 2014 Mar 3;9(3):e90422. doi: 10.1371/journal.pone.0090422. eCollection 2014.
2
The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013.PRIDE 数据库及相关工具:2013 年的现状。
Nucleic Acids Res. 2013 Jan;41(Database issue):D1063-9. doi: 10.1093/nar/gks1262. Epub 2012 Nov 29.
3
ArrayExpress update--trends in database growth and links to data analysis tools.
产志贺毒素大肠杆菌O157:H7(阪崎株)的全转录组分析表明,暴露于菠菜和生菜提取物时会产生植物物种特异性代谢反应。
Front Microbiol. 2016 Jul 12;7:1088. doi: 10.3389/fmicb.2016.01088. eCollection 2016.
4
Mechanism to control the cell lysis and the cell survival strategy in stationary phase under heat stress.热应激下控制细胞裂解的机制及稳定期的细胞存活策略
Springerplus. 2015 Oct 13;4:599. doi: 10.1186/s40064-015-1415-7. eCollection 2015.
5
Global genome response of Escherichia coli O157∶H7 Sakai during dynamic changes in growth kinetics induced by an abrupt downshift in water activity.在水分活度突然下降引起的生长动力学动态变化过程中,大肠杆菌O157∶H7 Sakai的全基因组反应
PLoS One. 2014 Mar 3;9(3):e90422. doi: 10.1371/journal.pone.0090422. eCollection 2014.
ArrayExpress 更新——数据库增长趋势及与数据分析工具的链接。
Nucleic Acids Res. 2013 Jan;41(Database issue):D987-90. doi: 10.1093/nar/gks1174. Epub 2012 Nov 27.
4
Integrated transcriptomic and proteomic analysis of the physiological response of Escherichia coli O157:H7 Sakai to steady-state conditions of cold and water activity stress.对大肠杆菌 O157:H7 阪崎菌株在低温和水分活度胁迫的稳态条件下生理反应的转录组和蛋白质组综合分析。
Mol Cell Proteomics. 2012 Jan;11(1):M111.009019. doi: 10.1074/mcp.M111.009019. Epub 2011 Oct 18.
5
Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress.乙醇胁迫下平行进化的大肠杆菌转录组分析。
BMC Genomics. 2010 Oct 19;11:579. doi: 10.1186/1471-2164-11-579.
6
Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses.在静止期时,对暴露于无机和有机酸的大肠杆菌 O157:H7 和 K-12 培养物进行转录组分析,揭示了酸化剂和菌株特异性的酸耐受反应。
Appl Environ Microbiol. 2010 Oct;76(19):6514-28. doi: 10.1128/AEM.02392-09. Epub 2010 Aug 13.
7
Metabolomic and transcriptomic stress response of Escherichia coli.大肠杆菌的代谢组学和转录组学应激反应。
Mol Syst Biol. 2010 May 11;6:364. doi: 10.1038/msb.2010.18.
8
On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics.基于无标记串联质谱蛋白质组学的谱计数数据的双二项式模型分析。
Bioinformatics. 2010 Feb 1;26(3):363-9. doi: 10.1093/bioinformatics/btp677. Epub 2009 Dec 9.
9
Modulating the bacterial surface with small RNAs: a new twist on PhoP/Q-mediated lipopolysaccharide modification.利用小RNA调控细菌表面:PhoP/Q介导的脂多糖修饰的新变化
Mol Microbiol. 2009 Dec;74(6):1289-94. doi: 10.1111/j.1365-2958.2009.06943.x. Epub 2009 Nov 10.
10
Global responses of Escherichia coli to adverse conditions determined by microarrays and FT-IR spectroscopy.通过微阵列和傅里叶变换红外光谱法测定大肠杆菌对不利条件的全局响应。
Can J Microbiol. 2009 Jun;55(6):714-28. doi: 10.1139/w09-016.