BioBlend对象：使用Galaxy进行元计算。

BioBlend.objects: metacomputing with Galaxy.

作者信息

Leo Simone, Pireddu Luca, Cuccuru Gianmauro, Lianas Luca, Soranzo Nicola, Afgan Enis, Zanetti Gianluigi

机构信息

CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruđer Bošković Institute, 10000 Zagreb, Croatia CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruđer Bošković Institute, 10000 Zagreb, Croatia.

CRS4, Polaris, 09010 Pula (CA), Università degli Studi di Cagliari, via Università 40, 09124 Cagliari, Italy and Ruđer Bošković Institute, 10000 Zagreb, Croatia.

出版信息

Bioinformatics. 2014 Oct;30(19):2816-7. doi: 10.1093/bioinformatics/btu386. Epub 2014 Jun 12.

DOI:10.1093/bioinformatics/btu386

PMID:24928211

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4173020/

Abstract

SUMMARY

BioBlend.objects is a new component of the BioBlend package, adding an object-oriented interface for the Galaxy REST-based application programming interface. It improves support for metacomputing on Galaxy entities by providing higher-level functionality and allowing users to more easily create programs to explore, query and create Galaxy datasets and workflows.

AVAILABILITY AND IMPLEMENTATION

BioBlend.objects is available online at https://github.com/afgane/bioblend. The new object-oriented API is implemented by the galaxy/objects subpackage.

摘要

BioBlend.objects是BioBlend包的一个新组件，为基于Galaxy REST的应用程序编程接口添加了一个面向对象的接口。它通过提供更高级别的功能并允许用户更轻松地创建程序来探索、查询和创建Galaxy数据集及工作流程，从而改进了对Galaxy实体上的元计算的支持。