Roger Magali, Biaso Frédéric, Castelle Cindy J, Bauzan Marielle, Chaspoul Florence, Lojou Elisabeth, Sciara Giuliano, Caffarri Stefano, Giudici-Orticoni Marie-Thérèse, Ilbert Marianne
Unité de Bioénergétique et Ingénierie des Protéines, Institut de Microbiologie de la Méditerranée, CNRS-UMR7281, Aix-Marseille Université, Marseille, France.
Department of Earth and Planetary Science, University of California, Berkeley, California, United States of America.
PLoS One. 2014 Jun 16;9(6):e98941. doi: 10.1371/journal.pone.0098941. eCollection 2014.
Cupredoxins are widespread copper-binding proteins, mainly involved in electron transfer pathways. They display a typical rigid greek key motif consisting of an eight stranded β-sandwich. A fascinating feature of cupredoxins is the natural diversity of their copper center geometry. These geometry variations give rise to drastic changes in their color, such as blue, green, red or purple. Based on several spectroscopic and structural analyses, a connection between the geometry of their copper-binding site and their color has been proposed. However, little is known about the relationship between such diversity of copper center geometry in cupredoxins and possible implications for function. This has been difficult to assess, as only a few naturally occurring green and red copper sites have been described so far. We report herein the spectrocopic characterization of a novel kind of single domain cupredoxin of green color, involved in a respiratory pathway of the acidophilic organism Acidithiobacillus ferrooxidans. Biochemical and spectroscopic characterization coupled to bioinformatics analysis reveal the existence of some unusual features for this novel member of the green cupredoxin sub-family. This protein has the highest redox potential reported to date for a green-type cupredoxin. It has a constrained green copper site insensitive to pH or temperature variations. It is a green-type cupredoxin found for the first time in a respiratory pathway. These unique properties might be explained by a region of unknown function never found in other cupredoxins, and by an unusual length of the loop between the second and the fourth copper ligands. These discoveries will impact our knowledge on non-engineered green copper sites, whose involvement in respiratory chains seems more widespread than initially thought.
铜蓝蛋白是广泛存在的铜结合蛋白,主要参与电子传递途径。它们呈现出一种典型的由八条链组成的β折叠三明治结构的刚性希腊钥匙基序。铜蓝蛋白一个引人入胜的特点是其铜中心几何结构的天然多样性。这些几何结构的变化导致其颜色发生剧烈变化,如蓝色、绿色、红色或紫色。基于多项光谱和结构分析,人们提出了它们铜结合位点的几何结构与其颜色之间的联系。然而,对于铜蓝蛋白中铜中心几何结构的这种多样性与可能的功能影响之间的关系却知之甚少。由于到目前为止仅描述了少数天然存在的绿色和红色铜位点,因此很难对此进行评估。我们在此报告了一种新型单结构域绿色铜蓝蛋白的光谱表征,该蛋白参与嗜酸生物氧化亚铁硫杆菌的呼吸途径。生化和光谱表征与生物信息学分析相结合,揭示了这种绿色铜蓝蛋白亚家族新成员存在一些不寻常的特征。该蛋白具有迄今为止报道的绿色型铜蓝蛋白中最高的氧化还原电位。它具有一个对pH或温度变化不敏感的受限绿色铜位点。它是首次在呼吸途径中发现的绿色型铜蓝蛋白。这些独特的性质可能由其他铜蓝蛋白中从未发现的未知功能区域以及第二个和第四个铜配体之间环的不寻常长度来解释。这些发现将影响我们对非工程绿色铜位点的认识,其在呼吸链中的参与似乎比最初认为的更为广泛。