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粪肠球菌亚种,从人类粪便中分离得到。

Bifidobacterium faecale sp. nov., isolated from human faeces.

机构信息

Department of Systems Biotechnology, Chung-Ang University, Anseong 456-756, Republic of Korea.

Department of Animal Science and Technology, Chung-Ang University, Anseong 456-756, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3134-3139. doi: 10.1099/ijs.0.063479-0. Epub 2014 Jun 18.

DOI:10.1099/ijs.0.063479-0
PMID:24944342
Abstract

A novel strain, designated strain CU3-7(T), was isolated from faeces of a two-week-old baby. The isolate was Gram-staining-positive, anaerobic and rod-shaped. Results from 16S rRNA gene sequence analysis revealed that strain CU3-7(T) was phylogenetically affiliated with members of the genus Bifidobacterium. Strain CU3-7(T) showed the highest level of sequence similarity with Bifidobacterium adolescentis KCTC 3216(T) (98.4 %), followed by Bifidobacterium ruminantium KCTC 3425(T) (97.9 %). Analysis of hsp60 sequences showed that strain CU3-7(T) was closely related to B. adolescentis KCTC 3216(T) (94.0 %) and B. ruminantium KCTC 3425(T) (92.5 %). The DNA-DNA hybridization values with the closely related strains were all below the cut-off value for species delineation, 17.0 % with B. ruminantium KCTC 3425(T) and 14.9 % with B. adolescentis KCTC 3216(T). Fructose-6-phosphate phosphoketolase activity was detected. The predominant cellular fatty acids were C16 : 0 (27.7 %), C18 : 1ω9c (27.4 %) and C18 : 1ω9c dimethylacetate (15.5 %). The DNA G+C content was 58.6 mol%. On the basis of polyphasic taxonomy, strain CU3-7(T) should be classified as the type strain of a novel species within the genus Bifidobacterium, for which the name Bifidobacterium faecale sp. nov. is proposed ( = KACC 17904(T) = JCM 19861(T)).

摘要

一株新型菌株,命名为 CU3-7(T) 株,从一名两周大婴儿的粪便中分离得到。该分离株革兰氏染色阳性,为厌氧菌,呈杆状。16S rRNA 基因序列分析结果表明,CU3-7(T) 株与双歧杆菌属的成员具有系统发育相关性。CU3-7(T) 株与双歧杆菌青春亚种 KCTC 3216(T)(98.4%)的序列相似性最高,其次是双歧杆菌反刍亚种 KCTC 3425(T)(97.9%)。hsp60 序列分析表明,CU3-7(T) 株与双歧杆菌青春亚种 KCTC 3216(T)(94.0%)和双歧杆菌反刍亚种 KCTC 3425(T)(92.5%)密切相关。与密切相关菌株的 DNA-DNA 杂交值均低于种间区分的界限值(17.0%与双歧杆菌反刍亚种 KCTC 3425(T),14.9%与双歧杆菌青春亚种 KCTC 3216(T))。检测到果糖-6-磷酸磷酸酮醇酶活性。主要细胞脂肪酸为 C16:0(27.7%)、C18:1ω9c(27.4%)和 C18:1ω9c 二甲酯(15.5%)。DNA G+C 含量为 58.6 mol%。基于多相分类学,CU3-7(T) 株应归类为双歧杆菌属的一个新型种的模式株,建议将其命名为粪双歧杆菌(Bifidobacterium faecale sp. nov.)。(=KACC 17904(T)=JCM 19861(T))。

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