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多杀菌素福乐糖胺基转移酶SpnP的结构研究

Structural studies of the spinosyn forosaminyltransferase, SpnP.

作者信息

Isiorho Eta A, Jeon Byung-Sun, Kim Nam Ho, Liu Hung-wen, Keatinge-Clay Adrian T

机构信息

Division of Medicinal Chemistry, College of Pharmacy, and ‡Department of Chemistry and Biochemistry, The University of Texas at Austin , Austin, Texas 78712, United States.

出版信息

Biochemistry. 2014 Jul 8;53(26):4292-301. doi: 10.1021/bi5003629. Epub 2014 Jun 26.

Abstract

Spinosyns A and D (spinosad) are complex polyketide natural products biosynthesized through the cooperation of a modular polyketide synthase and several tailoring enzymes. SpnP catalyzes the final tailoring step, transferring forosamine from a TDP-D-forosamine donor substrate to a spinosyn pseudoaglycone acceptor substrate. Sequence analysis indicated that SpnP belongs to a small group of glycosyltransferases (GTs) that require an auxiliary protein for activation. However, unlike other GTs in this subgroup, no putative auxiliary protein gene could be located in the biosynthetic gene cluster. To learn more about SpnP, the structures of SpnP and its complex with TDP were determined to 2.50 and 3.15 Å resolution, respectively. Binding of TDP causes the reordering of several residues in the donor substrate pocket. SpnP possesses a structural feature that has only been previously observed in the related glycosyltransferase EryCIII, in which it mediates association with the auxiliary protein EryCII. This motif, H-X-R-X5-D-X5-R-X12-20-D-P-X3-W-L-X12-18-E-X4-G, may be predictive of glycosyltransferases that interact with an auxiliary protein. A reverse glycosyl transfer assay demonstrated that SpnP possesses measurable activity in the absence of an auxiliary protein. Our data suggest that SpnP can bind its donor substrate by itself but that the glycosyl transfer reaction is facilitated by an auxiliary protein that aids in the correct folding of a flexible loop surrounding the pseudoaglycone acceptor substrate-binding pocket.

摘要

多杀菌素A和D(多杀菌素)是复杂的聚酮类天然产物,通过模块化聚酮合酶和几种修饰酶的协同作用生物合成。SpnP催化最后的修饰步骤,将福乐胺从TDP-D-福乐胺供体底物转移到多杀菌素假苷元受体底物上。序列分析表明,SpnP属于一小类需要辅助蛋白激活的糖基转移酶(GTs)。然而,与该亚组中的其他GTs不同,在生物合成基因簇中找不到推定的辅助蛋白基因。为了更多地了解SpnP,分别以2.50和3.15 Å的分辨率测定了SpnP及其与TDP复合物的结构。TDP的结合导致供体底物口袋中几个残基的重排。SpnP具有一种结构特征,这种特征以前只在相关的糖基转移酶EryCIII中观察到,在该酶中它介导与辅助蛋白EryCII的结合。这个基序,H-X-R-X⁵-D-X⁵-R-X¹²⁻²⁰-D-P-X³-W-L-X¹²⁻¹⁸-E-X⁴-G,可能预示着与辅助蛋白相互作用的糖基转移酶。反向糖基转移试验表明,SpnP在没有辅助蛋白的情况下具有可测量的活性。我们的数据表明,SpnP可以自行结合其供体底物,但糖基转移反应由一种辅助蛋白促进,该辅助蛋白有助于围绕假苷元受体底物结合口袋的柔性环正确折叠。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b399/4095934/1e8f1623044d/bi-2014-003629_0007.jpg

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