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末端(4R)-氟脯氨酸和(4S)-氟脯氨酸残基对聚脯氨酸构象的影响。

Impacts of terminal (4R)-fluoroproline and (4S)-fluoroproline residues on polyproline conformation.

作者信息

Lin Yu-Ju, Horng Jia-Cherng

机构信息

Department of Chemistry, National Tsing Hua University, Hsinchu, 30013, Taiwan, ROC.

出版信息

Amino Acids. 2014 Oct;46(10):2317-24. doi: 10.1007/s00726-014-1783-2. Epub 2014 Jun 20.

Abstract

Many interests have been focused on prolyl cis-trans isomerization which is related to protein folding and isomer-specific biochemical recognition. Since polyproline can adopt either type I (PPI) helices with all cis amide bonds or type II (PPII) helices with all trans amide bonds, it has been a valuable model to study the prolyl isomerization. Recent studies have shown that stereoelectronic effects govern the stability of PPII structure and the rate of PPII → PPI conversion. To further explore the terminal stereoelectronic effects on polyproline conformation, herein we synthesized a series of host-guest peptides in which (2S,4S)-4-fluoroproline (flp) or (2S,4R)-4-fluoroproline (Flp) residues are incorporated into the C- or N-terminal end of a peptide and studied the thermodynamic and kinetic consequences on polyproline conformation. Circular dichroism measurements revealed that inserting 4-fluoroproline residues into the C terminus of a polyproline peptide induces a great stereoelectronic effect on PPII stability and PPII → PPI conversion rates. From the C terminus, a (Flp)₃ triplet stabilizes PPII structure and increases the transition barrier of PPII → PPI conversion by 1.53 kJ mol⁻¹ while a (flp)₃ triplet destabilizes PPII conformation and reduce the PPII → PPI transition barrier by 4.61 kJ mol⁻¹. In contrast, the 4-fluoroproline substitutions at the N terminus do not exhibit distinct stereoelectronic effects on PPII stability and PPII → PPI conversion rates. Our data demonstrate that the C-terminal stereoelectronic effects have a more dramatic impact on PPII stability and PPII → PPI conversion kinetics.

摘要

许多研究兴趣都集中在与蛋白质折叠及异构体特异性生化识别相关的脯氨酰顺反异构化上。由于聚脯氨酸可以采用酰胺键全为顺式的I型(PPI)螺旋或酰胺键全为反式的II型(PPII)螺旋,它一直是研究脯氨酰异构化的一个有价值的模型。最近的研究表明,立体电子效应决定了PPII结构的稳定性以及PPII→PPI转化的速率。为了进一步探索末端立体电子效应对聚脯氨酸构象的影响,我们在此合成了一系列主客体肽,其中(2S,4S)-4-氟脯氨酸(flp)或(2S,4R)-4-氟脯氨酸(Flp)残基被引入到肽的C端或N端,并研究了其对聚脯氨酸构象的热力学和动力学影响。圆二色性测量表明,在聚脯氨酸肽的C端插入4-氟脯氨酸残基会对PPII稳定性和PPII→PPI转化率产生很大的立体电子效应。从C端开始,(Flp)₃三联体稳定了PPII结构,并使PPII→PPI转化的过渡势垒增加了1.53 kJ mol⁻¹,而(flp)₃三联体则使PPII构象不稳定,并使PPII→PPI过渡势垒降低了4.61 kJ mol⁻¹。相比之下,在N端的4-氟脯氨酸取代对PPII稳定性和PPII→PPI转化率没有明显的立体电子效应。我们的数据表明,C端立体电子效应对PPII稳定性和PPII→PPI转化动力学有更显著的影响。

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