Liu Qi, Wang Zhen, Wu Yuhong, Cao Lihua, Tang Qingzhu, Xing Xuesha, Ma Hongwei, Zhang Shifa, Luo Yang
The Research Center for Medical Genomics, MOH Key Laboratory of Cell Biology and Key Laboratory of Medical Cell Biology, Ministry of Education, China Medical University, Shenyang 110001, China.
BMC Med Genet. 2014 Jun 20;15:69. doi: 10.1186/1471-2350-15-69.
Dyschromatosis symmetrica hereditaria (DSH) is an autosomal dominantly inherited skin disease associated with mutations of ADAR1, the gene that encodes a double-stranded RNA-specific adenosine deaminase. The purpose of this study was to investigate the potential mutations in ADAR1 in seven Chinese families with DSH.
All the coding exons including adjacent intronic as well as 5' and 3' untranslated region (UTR) of ADAR1 were screened by direct sequencing. Moreover, quantitative reverse-transcription polymerase chain (qRT-PCR) and Western blot were applied to determine the pathogenic effects associated with the mutations.
Molecular genetic investigations detected five novel mutations (c.556C > T, c.3001C > T, c.1936_1937insTG, c.1065_1068delGACA and c.1601G > A resulting in p.Gln186X, p.Arg1001Cys, p.Phe646LeufsX16, p.Asp357ArgfsX47 and p.Gly471AspfsX30 protein changes, respectively) as well as two previously reported (c.2744C > T and c.3463C > T causing p.Ser915Phe and p.Arg1155Trp protein changes, respectively). Among them, we found that the substitution c.1601G > A at the last nucleotide of exon 2 compromised the recognition of the splice donor site of intron 2, inducing an aberrant transcript with 190-bp deletion in exon 2 and causing an approximately 50% reduction of ADAR1 mRNA level in affected individual. In addition, consistent with the predicted results, the expression patterns of other novel mutations were detected by Western blot.
We identified five novel and two recurrent mutations of the ADAR1 gene in seven Chinese families with DSH and investigated potential effects of the novel mutations in this study. Our study expands the database on mutations of ADAR1 and for the first time, demonstrates the importance of exonic nucleotides at exon-intron junctions for ADAR1 splicing.
对称性遗传性色素异常症(DSH)是一种常染色体显性遗传性皮肤病,与ADAR1基因突变有关,ADAR1基因编码一种双链RNA特异性腺苷脱氨酶。本研究旨在调查7个中国DSH家系中ADAR1基因的潜在突变。
通过直接测序对ADAR1基因的所有编码外显子,包括相邻内含子以及5'和3'非翻译区(UTR)进行筛查。此外,应用定量逆转录聚合酶链反应(qRT-PCR)和蛋白质免疫印迹法来确定与这些突变相关的致病效应。
分子遗传学研究检测到5个新突变(c.556C>T、c.3001C>T、c.1936_1937insTG、c.1065_1068delGACA和c.1601G>A,分别导致p.Gln186X、p.Arg1001Cys、p.Phe646LeufsX16、p.Asp357ArgfsX47和p.Gly471AspfsX30蛋白质变化)以及2个先前报道的突变(c.2744C>T和c.3463C>T,分别导致p.Ser915Phe和p.Arg1155Trp蛋白质变化)。其中,我们发现外显子2最后一个核苷酸处的c.1601G>A替换破坏了内含子2剪接供体位点的识别,导致外显子2出现190-bp缺失的异常转录本,并使患病个体中ADAR1 mRNA水平降低约50%。此外,与预测结果一致,通过蛋白质免疫印迹法检测到了其他新突变的表达模式。
我们在7个中国DSH家系中鉴定出ADAR1基因的5个新突变和2个复发突变,并在本研究中调查了这些新突变的潜在影响。我们的研究扩展了ADAR1基因突变数据库,并首次证明了外显子-内含子交界处的外显子核苷酸对ADAR1剪接的重要性。