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加权形态学:一种对念珠藻目(蓝细菌)进行系统发育评估的新方法。

Weighted morphology: a new approach towards phylogenetic assessment of Nostocales (Cyanobacteria).

作者信息

Mishra Swati, Bhargava Poonam, Adhikary Siba Prasad, Pradeep Anubhav, Rai Lal Chand

机构信息

Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi, 221005, India,

出版信息

Protoplasma. 2015 Jan;252(1):145-63. doi: 10.1007/s00709-014-0629-9. Epub 2014 Jun 26.

Abstract

The classification of order Nostocales (Cyanobacteria) and inter relationships of morphologically similar taxa is still debatable due to ever changing morphological features. No attempt has been made to improve the morphological taxonomy despite the fact that it is the morphology that represents the totality of genes. To test the validity of morphological taxonomy and fine tune the phylogenetic relationships within the order Nostocales a new weighted morphology approach was applied by using 76 isolates and their 16S rRNA gene sequences. Further, the study was extended with morphological data set of the remaining 232 taxa for which no molecular data are yet available. Trichome aggregation, heterocyst shape, and akinete shape are suggested as important and stable features for identification. At 30% weight assignment to the selected morphological characters, morphological taxonomy found 36% compatible with 16S tree. Adding weight to the morphological characters considerably improved the congruence between the morphology and 16S rRNA-based phylogenetic trees of the order Nostocales. When the weighting procedure was extended to all the Nostocalean members irrespective of molecular data availability, it was found that Nostoc sphaericum and Nostoc microscopicum closely assembled in a single clade. Closer arrangement of Aulosira and Nodularia represent the subfamily aulosirae (Bornet and Flahault Ann Sci Nat Bot 7:223-224, 1888) while taxonomic affiliation of Cylindrospermum with Nostoc, Anabaena, and Raphidiopsis representing the subfamily anabaenae (Bornet and Flahault Ann Sci Nat Bot 7:223-224, 1888) was resolved.

摘要

由于形态特征不断变化,念珠藻目(蓝细菌)的分类以及形态相似类群之间的相互关系仍存在争议。尽管形态代表了基因的整体,但尚未有人尝试改进形态分类学。为了检验形态分类学的有效性并微调念珠藻目内的系统发育关系,采用了一种新的加权形态学方法,使用了76个分离株及其16S rRNA基因序列。此外,该研究还扩展到了其余232个类群的形态数据集,这些类群尚无分子数据。藻丝聚集、异形胞形状和厚壁孢子形状被认为是重要且稳定的鉴定特征。当为选定的形态特征赋予30%的权重时,形态分类学发现36%与16S树状图相符。增加形态特征的权重显著提高了念珠藻目形态学与基于16S rRNA的系统发育树之间的一致性。当加权程序扩展到所有念珠藻目成员,而不考虑分子数据的可用性时,发现球形念珠藻和微小念珠藻紧密聚集在一个单系类群中。鞘丝藻属和节球藻属的更紧密排列代表了鞘丝藻亚科(博内和弗拉奥尔特,《植物学自然科学年报》7:223 - 224,1888年),而柱孢藻属与念珠藻属、鱼腥藻属和拟柱孢藻属的分类归属代表了鱼腥藻亚科(博内和弗拉奥尔特,《植物学自然科学年报》7:223 - 224,1888年),这一分类归属得到了解决。

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