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本文引用的文献

1
Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria.两种羧酶体的功能、组成和进化:多面体形微结构,促进蓝细菌和一些 Proteobacteria 中的 CO2 固定。
Microbiol Mol Biol Rev. 2013 Sep;77(3):357-79. doi: 10.1128/MMBR.00061-12.
2
CaCO3 biomineralization on cyanobacterial surfaces: insights from experiments with three Synechococcus strains.在蓝细菌表面的碳酸钙生物矿化作用:来自三种聚球藻菌株实验的见解。
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Role of polyphosphate in thermophilic Synechococcus sp. from microbial mats.聚磷酸盐在微生物席中嗜热聚球藻中的作用。
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Inactivation of Ca(2+)/H(+) exchanger in Synechocystis sp. strain PCC 6803 promotes cyanobacterial calcification by upregulating CO(2)-concentrating mechanisms.在集胞藻 PCC 6803 中钙/氢离子交换器失活通过上调 CO2浓缩机制促进蓝细菌钙化。
Appl Environ Microbiol. 2013 Jul;79(13):4048-55. doi: 10.1128/AEM.00681-13. Epub 2013 Apr 26.
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Precipitation of calcite induced by Synechocystis sp. PCC6803.由集胞藻 PCC6803 诱导的方解石沉淀。
World J Microbiol Biotechnol. 2013 Oct;29(10):1801-11. doi: 10.1007/s11274-013-1341-1. Epub 2013 Mar 31.
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing.利用多样性驱动的基因组测序提高蓝藻门的覆盖率。
Proc Natl Acad Sci U S A. 2013 Jan 15;110(3):1053-8. doi: 10.1073/pnas.1217107110. Epub 2012 Dec 31.
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Phylogenetic modeling of lateral gene transfer reconstructs the pattern and relative timing of speciations.种系发生建模的水平基因转移重建了物种形成的模式和相对时间。
Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17513-8. doi: 10.1073/pnas.1202997109. Epub 2012 Oct 4.
8
An early-branching microbialite cyanobacterium forms intracellular carbonates.早期分枝微生物岩蓝细菌形成细胞内碳酸盐。
Science. 2012 Apr 27;336(6080):459-62. doi: 10.1126/science.1216171.
9
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
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10
Free Ca2+ as an early intracellular biomarker of exposure of cyanobacteria to environmental pollution.作为一种早期的细胞内生物标志物,游离钙离子可用于指示蓝藻暴露于环境污染。
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细胞内碳酸钙生物矿化在蓝细菌中广泛存在。

Intracellular Ca-carbonate biomineralization is widespread in cyanobacteria.

作者信息

Benzerara Karim, Skouri-Panet Feriel, Li Jinhua, Férard Céline, Gugger Muriel, Laurent Thierry, Couradeau Estelle, Ragon Marie, Cosmidis Julie, Menguy Nicolas, Margaret-Oliver Isabel, Tavera Rosaluz, López-García Purificación, Moreira David

机构信息

Institut de Minéralogie, de Physique des Matériaux, et de Cosmochimie, Sorbonne Universités, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 7590, Université Pierre et Marie Curie Paris 06, Muséum National d'Histoire Naturelle, Institut de Recherche pour le Développement Unité Mixte de Recherche 206, 75005 Paris, France;

Collection des Cyanobactéries, Institut Pasteur, 75724 Paris Cedex 15, France;

出版信息

Proc Natl Acad Sci U S A. 2014 Jul 29;111(30):10933-8. doi: 10.1073/pnas.1403510111. Epub 2014 Jul 9.

DOI:10.1073/pnas.1403510111
PMID:25009182
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4121779/
Abstract

Cyanobacteria have played a significant role in the formation of past and modern carbonate deposits at the surface of the Earth using a biomineralization process that has been almost systematically considered induced and extracellular. Recently, a deep-branching cyanobacterial species, Candidatus Gloeomargarita lithophora, was reported to form intracellular amorphous Ca-rich carbonates. However, the significance and diversity of the cyanobacteria in which intracellular biomineralization occurs remain unknown. Here, we searched for intracellular Ca-carbonate inclusions in 68 cyanobacterial strains distributed throughout the phylogenetic tree of cyanobacteria. We discovered that diverse unicellular cyanobacterial taxa form intracellular amorphous Ca-carbonates with at least two different distribution patterns, suggesting the existence of at least two distinct mechanisms of biomineralization: (i) one with Ca-carbonate inclusions scattered within the cell cytoplasm such as in Ca. G. lithophora, and (ii) another one observed in strains belonging to the Thermosynechococcus elongatus BP-1 lineage, in which Ca-carbonate inclusions lie at the cell poles. This pattern seems to be linked with the nucleation of the inclusions at the septum of the cells, showing an intricate and original connection between cell division and biomineralization. These findings indicate that intracellular Ca-carbonate biomineralization by cyanobacteria has been overlooked by past studies and open new perspectives on the mechanisms and the evolutionary history of intra- and extracellular Ca-carbonate biomineralization by cyanobacteria.

摘要

蓝细菌在地球表面过去和现代碳酸盐沉积物的形成过程中发挥了重要作用,其生物矿化过程几乎一直被认为是诱导性的且发生在细胞外。最近,有报道称一种深分支蓝细菌物种——“候选石栖球囊蓝细菌(Candidatus Gloeomargarita lithophora)”能形成细胞内富含钙的无定形碳酸盐。然而,发生细胞内生物矿化的蓝细菌的重要性和多样性仍然未知。在此,我们在分布于蓝细菌系统发育树中的68个蓝细菌菌株中寻找细胞内碳酸钙内含物。我们发现,多种单细胞蓝细菌类群形成细胞内无定形碳酸钙,且具有至少两种不同的分布模式,这表明至少存在两种不同的生物矿化机制:(i)一种是碳酸钙内含物分散在细胞质中,如在“候选石栖球囊蓝细菌”中;(ii)另一种在属于嗜热栖热菌BP - 1谱系的菌株中观察到,其中碳酸钙内含物位于细胞两极。这种模式似乎与内含物在细胞隔膜处的成核有关,显示出细胞分裂与生物矿化之间复杂而独特的联系。这些发现表明,过去的研究忽略了蓝细菌的细胞内碳酸钙生物矿化现象,并为蓝细菌细胞内和细胞外碳酸钙生物矿化的机制及进化历史开辟了新的视角。