University of Chinese Academy of Sciences, Beijing 100049, PR China.
State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
Int J Syst Evol Microbiol. 2014 Oct;64(Pt 10):3411-3416. doi: 10.1099/ijs.0.065938-0. Epub 2014 Jul 11.
A Gram-stain-negative bacterium, strain TS-T11(T), was isolated from Tuosu lake, a saline lake (salinity 5.4%, w/v) in the Qaidam basin, Qinghai province, China. Its taxonomic position was determined by using a polyphasic approach. Cells of strain TS-T11(T) were non-spore-forming rods, 0.6-0.8 µm wide and 0.8-2.2 µm long, and motile by means of a single polar flagellum. Strain TS-T11(T) was strictly heterotrophic and aerobic. Cells were positive for catalase and oxidase. Growth was observed in the presence of 0.5-11.0% (w/v) NaCl (optimum 4.0-6.0%), at 4-40 °C (optimum 30-35 °C) and at pH 6.0-10.5 (optimum pH 7.5-8.5). Strain TS-T11(T) contained iso-C15:0, iso-C17:0 and iso-C17:1ω9c as the predominant fatty acids (>10%). The major respiratory quinone was Q-8. The polar lipids consisted of a mixture of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and nine uncharacterized phospholipids. The G+C content of genomic DNA was 46.8 mol% (Tm). Phylogenetic trees based on 16S rRNA gene sequences showed that strain TS-T11(T) was associated with the genus Idiomarina, and showed highest 16S rRNA gene sequence similarity to Idiomarina aestuarii KYW314(T) (97.4%) and Idiomarina salinarum ISL-52(T) (97.4%). DNA-DNA relatedness of strain TS-T11(T) to I. aestuarii JCM 16344(T) and I. salinarum DSM 21900(T) was 22.2 ± 2.4 and 11.5 ± 1.6%, respectively. Based on the data presented above, it was concluded that strain TS-T11(T) represents a novel species of the genus Idiomarina, for which the name Idiomarina planktonica sp. nov. is proposed. The type strain is TS-T11(T) ( = CGMCC 1.12458(T) = JCM 19263(T)).
一株革兰氏阴性细菌,菌株 TS-T11(T),从中国青海省柴达木盆地的托素湖(盐度 5.4%,w/v)中分离得到。其分类地位通过多相研究确定。菌株 TS-T11(T)的细胞为非孢子形成的杆状,宽 0.6-0.8 µm,长 0.8-2.2 µm,通过单一极鞭毛运动。菌株 TS-T11(T)严格异养和需氧。细胞呈过氧化氢酶和氧化酶阳性。在 0.5-11.0%(w/v)NaCl(最佳 4.0-6.0%)、4-40°C(最佳 30-35°C)和 pH 6.0-10.5(最佳 pH 7.5-8.5)的条件下可观察到生长。菌株 TS-T11(T)含有 iso-C15:0、iso-C17:0 和 iso-C17:1ω9c 作为主要脂肪酸(>10%)。主要呼吸醌为 Q-8。极性脂由磷脂酰乙醇胺、磷脂酰甘油、双磷脂酰甘油和 9 种未鉴定的磷脂组成。基因组 DNA 的 G+C 含量为 46.8 mol%(Tm)。基于 16S rRNA 基因序列的系统发育树显示,菌株 TS-T11(T)与 Idiomarina 属有关,与 Idiomarina aestuarii KYW314(T)(97.4%)和 Idiomarina salinarum ISL-52(T)(97.4%)的 16S rRNA 基因序列相似度最高。菌株 TS-T11(T)与 Idiomarina aestuarii JCM 16344(T)和 Idiomarina salinarum DSM 21900(T)的 DNA-DNA 相关度分别为 22.2±2.4%和 11.5±1.6%。基于上述数据,结论是菌株 TS-T11(T)代表 Idiomarina 属的一个新种,命名为 Idiomarina planktonica sp. nov.。模式菌株为 TS-T11(T)(=CGMCC 1.12458(T)=JCM 19263(T))。