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嗜碱拉克微菌属,新属,新种,一种从盐湖中分离出的交替单胞菌科成员。

Lacimicrobium alkaliphilum gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from a salt lake.

作者信息

Zhong Zhi-Ping, Liu Ying, Wang Fang, Zhou Yu-Guang, Liu Hong-Can, Liu Zhi-Pei

机构信息

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.

University of Chinese Academy of Sciences, Beijing 100049, PR China.

出版信息

Int J Syst Evol Microbiol. 2016 Jan;66(1):422-429. doi: 10.1099/ijsem.0.000735. Epub 2015 Nov 3.

Abstract

A Gram-stain-negative, facultatively aerobic bacterium, strain X13M-12T, was isolated from a salt lake (Lake Xiaochaidan) in the Qaidam basin, Qinghai Province, PR China. Cells of strain X13M-12T were slightly curved, rod-shaped, 0.5-0.8 μm wide and 1.2-2.3 μm long, and motile by means of a polar flagellum. Strain X13M-12T was catalase- and oxidase-positive. Growth was observed in the presence of 0-15.0 % (w/v) NaCl (optimum 3.0-5.0 %), and at 4-40 °C (optimum 25-30 °C) and pH 6.0-11.0 (optimum pH 8.5). Strain X13M-12T contained Q-8 as the sole respiratory quinone, and phosphatidylglycerol and phosphatidylethanolamine as the major polar lipids. The major cellular fatty acids (>10 % of totals) were C16 : 0, C16 : 1ω7c and/or C16 : 1ω6c, and C18 : 1ω7c and/or C18 : 1ω6c. Phylogenetic analysis, based on 16S rRNA gene sequences, showed that strain X13M-12T belonged to the family Alteromonadaceae and formed a distinct lineage, showing low gene sequence similarities to closely related genera: Bowmanella, Aestuariibacter and Salinimonas (16S rRNA gene sequence similarities, 93.0-93.1 %, 92.3-93.1 % and 92.6-92.7 %, respectively). In addition, strain X13M-12T showed < 92.7 % gene sequence similarities to other species of the family Alteromonadaceae. The DNA G+C content of strain X13M-12T was 49 mol% (Tm). Based on the data presented above, strain X13M-12T is considered to represent a novel genus and species of the family Alteromonadaceae, for which the name Lacimicrobium alkaliphilum gen. nov., sp. nov. is proposed. The type strain is X13M-12T ( = CGMCC 1.12923T = KCTC 42674T).

摘要

从中国青海省柴达木盆地的一个盐湖(小柴旦湖)中分离出了一株革兰氏染色阴性、兼性需氧细菌,菌株X13M - 12T。菌株X13M - 12T的细胞呈微弯曲的杆状,宽0.5 - 0.8μm,长1.2 - 2.3μm,通过极生鞭毛运动。菌株X13M - 12T过氧化氢酶和氧化酶呈阳性。在0 - 15.0%(w/v)NaCl(最适浓度3.0 - 5.0%)、4 - 40°C(最适温度25 - 30°C)和pH 6.0 - 11.0(最适pH 8.5)条件下可生长。菌株X13M - 12T含有Q - 8作为唯一的呼吸醌,磷脂酰甘油和磷脂酰乙醇胺作为主要极性脂类。主要细胞脂肪酸(占总量的>10%)为C16 : 0、C16 : 1ω7c和/或C16 : 1ω6c,以及C18 : 1ω7c和/或C18 : 1ω6c。基于16S rRNA基因序列的系统发育分析表明,菌株X13M - 12T属于交替单胞菌科,形成了一个独特的分支,与近缘属Bowmanella、Aestuariibacter和Salinimonas的基因序列相似性较低(16S rRNA基因序列相似性分别为93.0 - 93.1%、92.3 - 93.1%和92.6 - 92.7%)。此外,菌株X13M - 12T与交替单胞菌科的其他物种的基因序列相似性<92.7%。菌株X13M - 12T的DNA G + C含量为49 mol%(Tm)。基于上述数据,菌株X13M - 12T被认为代表交替单胞菌科的一个新属和新种,为此提出新属名为嗜碱盐湖微菌属(Lacimicrobium),新种名为嗜碱盐湖微菌(Lacimicrobium alkaliphilum)。模式菌株为X13M - 12T(= CGMCC 1.12923T = KCTC 42674T)。

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