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来自印度金奈的多重耐药结核分枝杆菌CWCFVRF PRTB 19痰液分离株的全基因组序列，与东非印度5基因群密切聚类。

Whole Genome Sequence of Polyresistant Mycobacterium tuberculosis CWCFVRF PRTB 19 Sputum Isolate from Chennai, India, Closely Clustering with East African Indian 5 Genogroup.

作者信息

Lakshmipathy Dhanurekha, Vetrivel Umashankar, Ramasubban Gayathri, Kulandai Lily Therese, Madhavan Hajib Narahari, Sridhar R, Meenakshi N

机构信息

L&T Microbiology Research Centre, Vision Research Foundation, Chennai, India.

Centre for Bioinformatics, Vision Research Foundation, Chennai, India.

出版信息

Genome Announc. 2014 Jul 17;2(4):e00702-14. doi: 10.1128/genomeA.00702-14.

DOI:10.1128/genomeA.00702-14
PMID:25035331
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4102868/
Abstract

We announce the draft genome sequence of a polyresistant Mycobacterium tuberculosis strain (CWCFVRF PRTB 19) isolated from the sputum of a clinically suspected tuberculosis patient, and it closely clusters to the East African Indian 5 (EAI5) lineage.

摘要

我们公布了从一名临床疑似结核病患者痰液中分离出的多重耐药结核分枝杆菌菌株（CWCFVRF PRTB 19）的基因组序列草图，它与东非印度5型（EAI5）谱系紧密聚类。

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Whole Genome Sequence of Polyresistant Mycobacterium tuberculosis CWCFVRF PRTB 19 Sputum Isolate from Chennai, India, Closely Clustering with East African Indian 5 Genogroup.来自印度金奈的多重耐药结核分枝杆菌CWCFVRF PRTB 19痰液分离株的全基因组序列，与东非印度5基因群密切聚类。
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引用本文的文献

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Whole-Genome Sequencing of Streptomycin-Resistant Mycobacterium tuberculosis Isolate VRFCWCF MRTB 180 Reveals Novel and Potential Mutations for Resistance.耐链霉素结核分枝杆菌分离株VRFCWCF MRTB 180的全基因组测序揭示了新的和潜在的耐药突变。
Genome Announc. 2014 Sep 11;2(5):e00919-14. doi: 10.1128/genomeA.00919-14.

本文引用的文献

1
Draft Genome Sequence of Multidrug-Resistant Mycobacterium tuberculosis Strain CWCFVRF MDRTB 670, Isolated from the Sputum of a Patient from Chennai, India, with Clinically Suspected Tuberculosis.从印度钦奈一名临床疑似结核病患者痰液中分离出的多重耐药结核分枝杆菌菌株CWCFVRF MDRTB 670的基因组序列草图
Genome Announc. 2014 May 22;2(3):e00475-14. doi: 10.1128/genomeA.00475-14.
2
SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences.SpolPred：从短基因组序列中快速准确地预测结核分枝杆菌 spoligotypes。
Bioinformatics. 2012 Nov 15;28(22):2991-3. doi: 10.1093/bioinformatics/bts544. Epub 2012 Sep 26.
3
Identifying Mycobacterium tuberculosis complex strain families using spoligotypes.使用间隔寡核苷酸分型技术鉴定结核分枝杆菌复合群菌株家族
Infect Genet Evol. 2006 Nov;6(6):491-504. doi: 10.1016/j.meegid.2006.03.003. Epub 2006 May 2.
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Mauve: multiple alignment of conserved genomic sequence with rearrangements.Mauve：带重排的保守基因组序列多重比对。
Genome Res. 2004 Jul;14(7):1394-403. doi: 10.1101/gr.2289704.
5
Molecular genetic basis of antimicrobial agent resistance in Mycobacterium tuberculosis: 1998 update.结核分枝杆菌抗微生物剂耐药性的分子遗传学基础：1998年更新版
Tuber Lung Dis. 1998;79(1):3-29. doi: 10.1054/tuld.1998.0002.