Loftus Fiona C, Shmygol Anatoly, Richardson Magnus J E
Warwick Systems Biology Centre, University of Warwick, Coventry, UK Division of Translational and Systems Medicine, Warwick Medical School, University of Warwick, Coventry, UK Warwick Systems Biology Doctoral Training Centre, University of Warwick, Coventry, UK
Division of Translational and Systems Medicine, Warwick Medical School, University of Warwick, Coventry, UK.
J Physiol. 2014 Oct 15;592(20):4447-63. doi: 10.1113/jphysiol.2014.275412. Epub 2014 Aug 1.
Successful childbirth depends on the occurrence of precisely coordinated uterine contractions during labour. Calcium indicator fluorescence imaging is one of the main techniques for investigating the mechanisms governing this physiological process and its pathologies. The effective spatiotemporal resolution of calcium signals is, however, limited by the motion of contracting tissue: structures of interest in the order of microns can move over a hundred times their width during a contraction. The simultaneous changes in local intensity and tissue configuration make motion tracking a non-trivial problem in image analysis and confound many of the standard techniques. This paper presents a method that tracks local motion throughout the tissue and allows for the almost complete removal of motion artefacts. This provides a stabilized calcium signal down to a pixel resolution, which, for the data examined, is in the order of a few microns. As a byproduct of image stabilization, a complete kinematic description of the contraction-relaxation cycle is also obtained. This contains novel information about the mechanical response of the tissue, such as the identification of a characteristic length scale, in the order of 40-50 μm, below which tissue motion is homogeneous. Applied to our data, we illustrate that the method allows for analyses of calcium dynamics in contracting myometrium in unprecedented spatiotemporal detail. Additionally, we use the kinematics of tissue motion to compare calcium signals at the subcellular level and local contractile motion. The computer code used is provided in a freely modifiable form and has potential applicability to in vivo calcium imaging of neural tissue, as well as other smooth muscle tissue.
成功分娩取决于分娩过程中子宫精确协调的收缩。钙指示剂荧光成像技术是研究这一生理过程及其病理机制的主要技术之一。然而,钙信号的有效时空分辨率受收缩组织运动的限制:微米级的感兴趣结构在一次收缩过程中移动的距离可能超过其宽度的一百倍。局部强度和组织结构的同时变化使得运动跟踪在图像分析中成为一个棘手的问题,并且许多标准技术都难以解决。本文提出了一种能够跟踪整个组织局部运动并几乎完全消除运动伪影的方法。这提供了低至像素分辨率的稳定钙信号,对于所研究的数据,该分辨率约为几微米。作为图像稳定的副产品,还获得了收缩 - 舒张周期的完整运动学描述。其中包含有关组织机械响应的新信息,例如识别出特征长度尺度,约为40 - 50μm,在此尺度以下组织运动是均匀的。应用于我们的数据时,我们证明该方法能够以前所未有的时空细节分析收缩子宫肌层中的钙动力学。此外,我们利用组织运动的运动学在亚细胞水平比较钙信号和局部收缩运动。所使用的计算机代码以可自由修改的形式提供,并且对神经组织以及其他平滑肌组织的体内钙成像具有潜在的适用性。