Jung Yong-Taek, Park Sooyeon, Park Ji-Min, Yoon Jung-Hoon
University of Science and Technology (UST), 113 Gwahak-ro, Yuseong-gu, Daejeon, Republic of Korea.
Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.
Int J Syst Evol Microbiol. 2014 Nov;64(Pt 11):3717-3723. doi: 10.1099/ijs.0.068361-0. Epub 2014 Aug 8.
A Gram-reaction-negative, aerobic, non-flagellated and coccoid, ovoid or rod-shaped bacterial strain, designated W-SW2(T), was isolated from seawater in the South Sea of South Korea. The novel strain grew optimally at pH 7.0-8.0, at 25 °C and in the presence of approximately 2% (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences revealed that strain W-SW2(T) fell within the clade comprising the type strains of species of the genus Loktanella, clustering and sharing the highest sequence similarity value (96.3%) with the type strain of Loktanella koreensis. The 16S rRNA gene sequence similarity values between strain W-SW2(T) and the type strains of the other species of the genus Loktanella were in the range 93.1-96.0%. The DNA G+C content of strain W-SW2(T) was 55.9 mol%. Strain W-SW2(T) contained Q-10 as the predominant ubiquinone and C(18:1)ω7c as the predominant fatty acid. The major polar lipids were phosphatidylcholine, phosphatidylglycerol, one unidentified aminolipid and one unidentified lipid. Differential phenotypic properties, together with the phylogenetic distinctiveness, revealed that strain W-SW2(T) is separated phylogenetically from other species of the genus Loktanella. On the basis of the data presented, strain W-SW2(T) is considered to represent a novel species of the genus Loktanella, for which the name Loktanella ponticola sp. nov. is proposed. The type strain is W-SW2(T) ( =KCTC 42133(T) =NBRC 110409(T)).
从韩国南海海水中分离出一株革兰氏阴性、需氧、无鞭毛、球状、卵形或杆状的细菌菌株,命名为W-SW2(T)。该新菌株在pH 7.0-8.0、25℃和约2%(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的邻接法系统发育树显示,菌株W-SW2(T)属于包含洛氏菌属各物种模式菌株的进化枝,与韩国洛氏菌模式菌株聚类并具有最高的序列相似性值(96.3%)。菌株W-SW2(T)与洛氏菌属其他物种模式菌株之间的16S rRNA基因序列相似性值在93.1-96.0%范围内。菌株W-SW2(T)的DNA G+C含量为55.9 mol%。菌株W-SW2(T)以Q-10作为主要泛醌,以C(18:1)ω7c作为主要脂肪酸。主要极性脂为磷脂酰胆碱、磷脂酰甘油、一种未鉴定的氨基脂和一种未鉴定的脂。不同的表型特征以及系统发育独特性表明,菌株W-SW2(T)在系统发育上与洛氏菌属的其他物种不同。根据所提供的数据,菌株W-SW2(T)被认为代表洛氏菌属的一个新物种,为此提出名为Loktanella ponticola sp. nov.的新名称。模式菌株为W-SW2(T)(=KCTC 42133(T)=NBRC 110409(T))。