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基于凝集素的糖组学:该技术是如何诞生的,何时诞生的?

Lectin-based glycomics: how and when was the technology born?

作者信息

Hirabayashi Jun

机构信息

Research Center for Stem Cell Engineering, National Institute of Advance Industrial Science and Technology (AIST), Central-2, 1-1-1, Umezono, Tsukuba, Ibaraki, 305-8568, Japan,

出版信息

Methods Mol Biol. 2014;1200:225-42. doi: 10.1007/978-1-4939-1292-6_20.

Abstract

Lectin-based glycomics is an emerging, comprehensive technology in the post-genome sciences. The technique utilizes a panel of lectins, which is a group of biomolecules capable of deciphering "glycocodes," with a novel platform represented by a lectin microarray. The method enables multiple glycan-lectin interaction analyses to be made so that differential glycan profiling can be performed in a rapid and sensitive manner. This approach is in clear contrast to another advanced technology, mass spectrometry, which requires prior glycan liberation. Although the lectin microarray cannot provide definitive structures of carbohydrates and their attachment sites, it gives useful clues concerning the characteristic features of glycoconjugates. These include differences not only in terminal modifications (e.g., sialic acid (Sia) linkage, types of fucosylation) but also in higher ordered structures in terms of glycan density, depth, and direction composed for both N- and O-glycans. However, before this technique began to be implemented in earnest, many other low-throughput methods were utilized in the late twentieth century. In this chapter, the author describes how the current lectin microarray technique has developed based on his personal experience.

摘要

基于凝集素的糖组学是后基因组科学中一项新兴的综合技术。该技术利用一组凝集素,这是一类能够解读“糖密码”的生物分子,并以凝集素微阵列作为新型平台。该方法能够进行多种聚糖-凝集素相互作用分析,从而可以快速且灵敏地进行差异聚糖分析。这种方法与另一种先进技术——质谱分析法形成鲜明对比,质谱分析法需要事先释放聚糖。尽管凝集素微阵列无法提供碳水化合物的确切结构及其连接位点,但它能给出有关糖缀合物特征的有用线索。这些线索不仅包括末端修饰方面的差异(例如唾液酸(Sia)连接、岩藻糖基化类型),还包括N-聚糖和O-聚糖在聚糖密度、深度和方向等更高层次结构方面的差异。然而,在这项技术开始真正实施之前,20世纪后期使用了许多其他低通量方法。在本章中,作者根据个人经验描述了当前凝集素微阵列技术是如何发展起来的。

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