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霍焰鹅八个新型微卫星标记的开发

Development of eight novel microsatellite markers for Huoyan geese.

作者信息

Cao Z Z, Su D, Zhao Y Y, Liu M, Gao M, Luan X H

机构信息

College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Shenyang, Liaoning, China.

College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Shenyang, Liaoning, China

出版信息

Genet Mol Res. 2014 Jul 25;13(3):5562-5. doi: 10.4238/2014.July.25.10.

Abstract

In this study, we isolated microsatellite DNA from the Huoyan goose genome with magnetic beads. As a result, 150 positive clones were identified, and 148 microsatellites were found. Among the 148 microsatellites, 69.6% were perfect, 17.6% were imperfect, and the rest were compound type (12.8%). Twenty microsatellite primers were used to screen 90 individuals from 3 Huoyan goose populations. Eight loci were polymorphic with a low number of alleles (2 to 4). The observed and expected heterozygosities ranged from 0.3556 to 1 and from 0.2923 to 0.6868, respectively. All the 8 polymorphic loci were in Hardy-Weinberg equilibrium. These molecular markers will be useful for future studies on population genetic structure and conservation genetics in Huoyan geese.

摘要

在本研究中,我们用磁珠从霍焰鹅基因组中分离出微卫星DNA。结果,鉴定出150个阳性克隆,发现了148个微卫星。在这148个微卫星中,69.6%为完美型,17.6%为非完美型,其余为复合型(12.8%)。使用20对微卫星引物对来自3个霍焰鹅群体的90只个体进行筛选。8个位点具有多态性,等位基因数量较少(2至4个)。观察到的杂合度和预期杂合度分别为0.3556至1和0.2923至0.6868。所有8个多态性位点均处于哈迪-温伯格平衡。这些分子标记将有助于未来对霍焰鹅群体遗传结构和保护遗传学的研究。

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