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源自甘蔗土壤宏基因组的碳水化合物结合模块(CBM_E1)的克隆、纯化、结晶及初步X射线研究。

Cloning, purification, crystallization and preliminary X-ray studies of a carbohydrate-binding module (CBM_E1) derived from sugarcane soil metagenome.

作者信息

Campos Bruna Medeia, Alvarez Thabata Maria, Liberato Marcelo Vizona, Polikarpov Igor, Gilbert Harry J, Zeri Ana Carolina de Mattos, Squina Fabio Marcio

机构信息

Laboratório Nacional de Biociências (LNBio), Centro Nacional de Pesquisa em Energia e Materiais (CNPEM), Campinas, São Paulo, Brazil.

Laboratório Nacional de Ciências e Tecnologia do Bioetanol (CTBE), Centro Nacional de Pesquisa em Energia e Materiais (CNPEM), Campinas, São Paulo, Brazil.

出版信息

Acta Crystallogr F Struct Biol Commun. 2014 Sep;70(Pt 9):1232-5. doi: 10.1107/S2053230X14015520. Epub 2014 Aug 27.

Abstract

In recent years, owing to the growing global demand for energy, dependence on fossil fuels, limited natural resources and environmental pollution, biofuels have attracted great interest as a source of renewable energy. However, the production of biofuels from plant biomass is still considered to be an expensive technology. In this context, the study of carbohydrate-binding modules (CBMs), which are involved in guiding the catalytic domains of glycoside hydrolases for polysaccharide degradation, is attracting growing attention. Aiming at the identification of new CBMs, a sugarcane soil metagenomic library was analyzed and an uncharacterized CBM (CBM_E1) was identified. In this study, CBM_E1 was expressed, purified and crystallized. X-ray diffraction data were collected to 1.95 Å resolution. The crystals, which were obtained by the sitting-drop vapour-diffusion method, belonged to space group I23, with unit-cell parameters a = b = c = 88.07 Å.

摘要

近年来,由于全球对能源的需求不断增长、对化石燃料的依赖、自然资源有限以及环境污染,生物燃料作为一种可再生能源来源引起了极大的关注。然而,从植物生物质生产生物燃料仍被认为是一项昂贵的技术。在这种背景下,参与引导糖苷水解酶的催化结构域进行多糖降解的碳水化合物结合模块(CBMs)的研究正受到越来越多的关注。为了鉴定新的CBMs,对一个甘蔗土壤宏基因组文库进行了分析,并鉴定出一个未表征的CBM(CBM_E1)。在本研究中,CBM_E1被表达、纯化并结晶。收集了分辨率为1.95 Å的X射线衍射数据。通过坐滴气相扩散法获得的晶体属于空间群I23,晶胞参数a = b = c = 88.07 Å。

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