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戈氏嗜盐栖菌新种（Halopiger goleamassiliensis sp. nov.）的非连续完成基因组序列及描述

Non-contiguous finished genome sequence and description of Halopiger goleamassiliensis sp. nov.

作者信息

Ikram Hassani Imene, Catherine Robert, Caroline Michelle, Didier Raoult, Hocine Hacène, Christelle Desnues

机构信息

USTHB Université, Laboratoire de Biologie Cellulaire et Moléculaire, Faculté de Biologie Algérie.

Aix-Marseille Université, URMITE, UM63, CNRS 7278.

出版信息

Stand Genomic Sci. 2013 Dec 31;9(3):956-9. doi: 10.4056/sigs.4618288. eCollection 2014 Jun 15.

DOI:10.4056/sigs.4618288
PMID:25197441
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4149028/
Abstract

Halopiger goleamassiliensis strain IIH3(T) sp. nov. is a novel, extremely halophilic archaeon within the genus Halopiger. This strain was isolated from an evaporitic sediment in El Golea Lake, Ghardaïa region (Algeria). The type strain is strain IIH3(T). H. goleamassiliensis is moderately thermophilic, neutrophilic, non-motile and coccus-shaped. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,906,923 bp long genome contains 3,854 protein-encoding genes and 49 RNA genes (1 gene is 16S rRNA, 1 gene is 23S rRNA, 3 genes are 5S rRNA, and 44 are tRNA genes).

摘要

戈勒阿马西利盐栖嗜盐菌IIH3(T)新种是盐栖嗜盐菌属内的一种新型极端嗜盐古菌。该菌株从阿尔及利亚加尔达亚地区戈勒阿湖的蒸发沉积物中分离得到。模式菌株为IIH3(T)。戈勒阿马西利盐栖嗜盐菌为嗜温性适中、嗜中性、无运动性且呈球菌状。在此，我们描述该生物体的特征，以及完整的基因组序列和注释。该基因组长度为3,906,923 bp，包含3,854个蛋白质编码基因和49个RNA基因（1个基因是16S rRNA，1个基因是23S rRNA，3个基因是5S rRNA，44个是tRNA基因）。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/60e1ccf47b15/sigs.4618288-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/3141c7c6e0e6/sigs.4618288-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/ae2a7a06023c/sigs.4618288-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/1e4bc6d97ab8/sigs.4618288-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/36929d1e4fc2/sigs.4618288-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/b8af014f6edd/sigs.4618288-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/60e1ccf47b15/sigs.4618288-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/3141c7c6e0e6/sigs.4618288-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/ae2a7a06023c/sigs.4618288-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/1e4bc6d97ab8/sigs.4618288-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/36929d1e4fc2/sigs.4618288-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/b8af014f6edd/sigs.4618288-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b5ce/4149028/60e1ccf47b15/sigs.4618288-f6.jpg

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