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冻融循环对使用直接进样高分辨率质谱法(HR-MS)分析海洋微藻提取物代谢谱重现性的影响。

The effect of freeze/thaw cycles on reproducibility of metabolic profiling of marine microalgal extracts using direct infusion high-resolution mass spectrometry (HR-MS).

作者信息

Eilertsen Hans Chr, Huseby Siv, Degerlund Maria, Eriksen Gunilla K, Ingebrigtsen Richard A, Hansen Espen

机构信息

Department of Arctic and Marine Biology, Faculty of Biosciences, Fisheries and Economics, UiT The Arctic University of Norway, Tromsø N-9037, Norway.

MabCent-SFI, UiT The Arctic University of Norway, Tromsø N-9037, Norway.

出版信息

Molecules. 2014 Oct 13;19(10):16373-80. doi: 10.3390/molecules191016373.

DOI:10.3390/molecules191016373
PMID:25314600
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6271507/
Abstract

During normal sample preparation, storage in freezers and subsequent freeze/thaw cycles are commonly introduced. The effect of freeze/thaw cycles on the metabolic profiling of microalgal extracts using HR-MS was investigated. Methanolic extracts of monocultures of Arctic marine diatoms were analyzed immediately after extraction, after seven days of storage at -78 °C (one freeze/thaw cycle), and after additional seven days at -20 °C (two freeze/thaw cycles). Repeated direct infusion high-resolution mass spectrometry analysis of microalgae extracts of the same sample showed that reproducibility was ca. 90% when a fresh (unfrozen) sample was analyzed. The overall reproducibility decreased further by ca. 10% after the first freeze/thaw-cycle, and after one more freeze/thaw cycle the reproducibility decreased further by ca. 7%. The decrease in reproducibility after freeze-thaw cycles could be attributed to sample degradation and not to instrument variability.

摘要

在正常样品制备过程中,通常会将样品储存在冰箱中,并进行后续的冻融循环。研究了冻融循环对使用高分辨质谱(HR-MS)的微藻提取物代谢谱的影响。北极海洋硅藻单培养物的甲醇提取物在提取后、在-78°C储存7天(一个冻融循环)后以及在-20°C再储存7天(两个冻融循环)后立即进行分析。对同一样品的微藻提取物进行重复直接进样高分辨质谱分析表明,分析新鲜(未冷冻)样品时的重现性约为90%。在第一个冻融循环后,总体重现性进一步下降约10%,再经过一个冻融循环后,重现性又进一步下降约7%。冻融循环后重现性的降低可归因于样品降解,而非仪器的变异性。

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本文引用的文献

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2
Mass spectrometry strategies in metabolomics.代谢组学中的质谱策略。
J Biol Chem. 2011 Jul 22;286(29):25435-42. doi: 10.1074/jbc.R111.238691. Epub 2011 Jun 1.
3
The role of metabolites and metabolomics in clinically applicable biomarkers of disease.代谢物和代谢组学在疾病临床应用生物标志物中的作用。
Arch Toxicol. 2011 Jan;85(1):5-17. doi: 10.1007/s00204-010-0609-6. Epub 2010 Oct 16.
4
Approaches and applications of quantitative LC-MS for proteomics and activitomics.蛋白质组学和活性组学定量液相色谱-质谱联用技术的方法与应用
Methods Mol Biol. 2010;658:3-17. doi: 10.1007/978-1-60761-780-8_1.
5
Inter-laboratory reproducibility of fast gas chromatography-electron impact-time of flight mass spectrometry (GC-EI-TOF/MS) based plant metabolomics.基于快速气相色谱-电子轰击-飞行时间质谱(GC-EI-TOF/MS)的植物代谢组学的实验室间重现性
Metabolomics. 2009 Dec;5(4):479-496. doi: 10.1007/s11306-009-0169-z. Epub 2009 Jul 24.
6
The effect of preanalytical factors on stability of the proteome and selected metabolites in cerebrospinal fluid (CSF).前分析因素对脑脊液中蛋白质组和选定代谢物稳定性的影响。
J Proteome Res. 2009 Dec;8(12):5511-22. doi: 10.1021/pr9005876.
7
The metabolomics of carotenoids in engineered cell factory.工程细胞工厂中类胡萝卜素的代谢组学
Appl Microbiol Biotechnol. 2009 Jul;83(6):989-99. doi: 10.1007/s00253-009-2069-6. Epub 2009 Jun 16.
8
Omics in algae: paving the way for a systems biological understanding of algal stress phenomena?藻类组学:为系统生物学理解藻类应激现象铺平道路?
Aquat Toxicol. 2009 May 5;92(3):114-21. doi: 10.1016/j.aquatox.2009.02.012. Epub 2009 Feb 27.
9
Analytical strategies for LC-MS-based targeted metabolomics.基于液相色谱-质谱联用的靶向代谢组学分析策略
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10
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J Proteome Res. 2007 Aug;6(8):3291-303. doi: 10.1021/pr070183p. Epub 2007 Jul 11.