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科尔特斯象拔蚌(Panopea globosa)线粒体基因组中的新型基因排列。

Novel gene arrangement in the mitochondrial genome of the Cortés Geoduck clam (Panopea globosa).

作者信息

Bisbal-Pardo Celia Isabel, Río-Portilla Miguel Angel Del, Rocha-Olivares Axayácatl

机构信息

a Molecular Ecology Laboratory, Biological Oceanography Department , CICESE , Carretera Ensenada-Tijuana 3918, Zona Playitas , Ensenada , Baja California , México and .

b Aquaculture Department , CICESE , Carretera Ensenada-Tijuana 3918, Zona Playitas , Ensenada , Baja California , México.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):1957-8. doi: 10.3109/19401736.2014.971305. Epub 2014 Oct 20.

DOI:10.3109/19401736.2014.971305
PMID:25329255
Abstract

The mitogenome of the Cortés geoduck clam Panopea globosa (Genbank accession KM580068) has a length of 15,469 bp and contains 13 protein-coding genes, 2 ribosomal RNA and 22 transfer RNA genes, as conventional metazoan mitochondrial genomes. Structural genes start with ATG, ATA and GTG codons; whereas TAG and TAA are used as stop codons. Base composition is: 23.3% A, 40.4% T, 10.1% C and 26.1% G. As is typical of marine bivalves, all genes are coded on the same strand. On the other hand, the gene arrangement is considerably different from those found in other heterodont bivalve mitogenomes.

摘要

科尔特斯女神蛤(Panopea globosa,Genbank登录号KM580068)的线粒体基因组长度为15,469 bp,包含13个蛋白质编码基因、2个核糖体RNA基因和22个转运RNA基因,这与传统后生动物线粒体基因组相同。结构基因起始密码子为ATG、ATA和GTG;终止密码子为TAG和TAA。碱基组成为:A占23.3%,T占40.4%,C占10.1%,G占26.1%。与典型的海洋双壳类动物一样,所有基因都编码在同一条链上。另一方面,该基因排列与其他异齿双壳类动物线粒体基因组中的基因排列有很大不同。

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