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对氨基载体蛋白介导的赖氨酸生物合成的结构洞察:嗜热栖热菌中LysZ·LysW复合物的晶体结构

Structural insight into amino group-carrier protein-mediated lysine biosynthesis: crystal structure of the LysZ·LysW complex from Thermus thermophilus.

作者信息

Yoshida Ayako, Tomita Takeo, Fujimura Tsutomu, Nishiyama Chiharu, Kuzuyama Tomohisa, Nishiyama Makoto

机构信息

From the Biotechnology Research Center, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657.

the Division of Biochemical Analysis, Central Laboratory of Medical Sciences, Juntendo University School of Medicine, 2-1-1 Hongo, Bunkyo-ku, Tokyo 113-8421, and.

出版信息

J Biol Chem. 2015 Jan 2;290(1):435-47. doi: 10.1074/jbc.M114.595983. Epub 2014 Nov 12.

Abstract

In the biosynthesis of lysine by Thermus thermophilus, the metabolite α-ketoglutarate is converted to the intermediate α-aminoadipate (AAA), which is protected by the 54-amino acid acidic protein LysW. In this study, we determined the crystal structure of LysZ from T. thermophilus (TtLysZ), an amino acid kinase that catalyzes the second step in the AAA to lysine conversion, which was in a complex with LysW at a resolution of 1.85 Å. A crystal analysis coupled with isothermal titration calorimetry of the TtLysZ mutants for TtLysW revealed tight interactions between LysZ and the globular and C-terminal extension domains of the LysW protein, which were mainly attributed to electrostatic forces. These results provided structural evidence for LysW acting as a protecting molecule for the α-amino group of AAA and also as a carrier protein to guarantee better recognition by biosynthetic enzymes for the efficient biosynthesis of lysine.

摘要

在嗜热栖热菌赖氨酸的生物合成过程中,代谢物α-酮戊二酸转化为中间体α-氨基己二酸(AAA),其由54个氨基酸的酸性蛋白LysW保护。在本研究中,我们确定了嗜热栖热菌LysZ(TtLysZ)的晶体结构,TtLysZ是一种氨基酸激酶,催化AAA向赖氨酸转化的第二步,其与LysW形成复合物,分辨率为1.85 Å。对TtLysZ突变体与TtLysW进行晶体分析并结合等温滴定量热法,揭示了LysZ与LysW蛋白的球状结构域和C末端延伸结构域之间存在紧密相互作用,这主要归因于静电力。这些结果为LysW作为AAAα-氨基的保护分子以及作为载体蛋白以确保生物合成酶更好地识别从而高效合成赖氨酸提供了结构证据。

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