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嗜酸性热原体中两种丝氨酸羟甲基转移酶的异源表达与特性研究。

Heterologous gene expression and characterization of two serine hydroxymethyltransferases from Thermoplasma acidophilum.

机构信息

Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.

Biochemistry Research Group, Faculty of Mathematics and Natural Sciences, Department of Chemistry, Institut Teknologi Bandung, Bandung, 40132, Indonesia.

出版信息

Extremophiles. 2021 Jul;25(4):393-402. doi: 10.1007/s00792-021-01238-9. Epub 2021 Jul 1.

Abstract

Serine hydroxymethyltransferase (SHMT) and threonine aldolase are classified as fold type I pyridoxal-5'-phosphate-dependent enzymes and engaged in glycine biosynthesis from serine and threonine, respectively. The acidothermophilic archaeon Thermoplasma acidophilum possesses two distinct SHMT genes, while there is no gene encoding threonine aldolase in its genome. In the present study, the two SHMT genes (Ta0811 and Ta1509) were heterologously expressed in Escherichia coli and Thermococcus kodakarensis, respectively, and biochemical properties of their products were investigated. Ta1509 protein exhibited dual activities to catalyze tetrahydrofolate (THF)-dependent serine cleavage and THF-independent threonine cleavage, similar to other SHMTs reported to date. In contrast, the Ta0811 protein lacks amino acid residues involved in the THF-binding motif and catalyzes only the THF-independent cleavage of threonine. Kinetic analysis revealed that the threonine-cleavage activity of the Ta0811 protein was 3.5 times higher than the serine-cleavage activity of Ta1509 protein. In addition, mRNA expression of Ta0811 gene in T. acidophilum was approximately 20 times more abundant than that of Ta1509. These observations suggest that retroaldol cleavage of threonine, mediated by the Ta0811 protein, has a major role in glycine biosynthesis in T. acidophilum.

摘要

丝氨酸羟甲基转移酶 (SHMT) 和苏氨酸醛缩酶被归类为折叠类型 I 吡哆醛-5'-磷酸依赖性酶,分别参与丝氨酸和苏氨酸向甘氨酸的生物合成。嗜酸高温古菌 Thermoplasma acidophilum 拥有两个不同的 SHMT 基因,而其基因组中没有编码苏氨酸醛缩酶的基因。在本研究中,两个 SHMT 基因(Ta0811 和 Ta1509)分别在大肠杆菌和Thermococcus kodakarensis 中异源表达,并研究了其产物的生化特性。Ta1509 蛋白表现出双重活性,可催化四氢叶酸 (THF) 依赖性丝氨酸裂解和 THF 非依赖性苏氨酸裂解,与迄今为止报道的其他 SHMT 相似。相比之下,Ta0811 蛋白缺乏参与 THF 结合基序的氨基酸残基,仅催化 THF 非依赖性苏氨酸裂解。动力学分析表明,Ta0811 蛋白的苏氨酸裂解活性比 Ta1509 蛋白的丝氨酸裂解活性高 3.5 倍。此外,在 T. acidophilum 中 Ta0811 基因的 mRNA 表达量比 Ta1509 基因高约 20 倍。这些观察结果表明,由 Ta0811 蛋白介导的苏氨酸逆醛缩酶裂解在 T. acidophilum 中甘氨酸生物合成中起主要作用。

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