Cantacessi Cinzia, Hofmann Andreas, Campbell Bronwyn E, Gasser Robin B
Department of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC, 3010, Australia.
Methods Mol Biol. 2015;1247:437-74. doi: 10.1007/978-1-4939-2004-4_31.
High-throughput molecular and computer technologies have become instrumental for systems biological explorations of pathogens, including parasites. For instance, investigations of the transcriptomes of different developmental stages of parasitic nematodes give insights into gene expression, regulation and function in a parasite, which is a significant step to understanding their biology, as well as interactions with their host(s) and disease. This chapter (1) gives a background on some key parasitic nematodes of socioeconomic importance, (2) describes sequencing and bioinformatic technologies for large-scale studies of the transcriptomes and genomes of these parasites, (3) provides some recent examples of applications and (4) emphasizes the prospects of fundamental biological explorations of parasites using these technologies for the development of new interventions to combat parasitic diseases.
高通量分子技术和计算机技术已成为对包括寄生虫在内的病原体进行系统生物学探索的重要工具。例如,对寄生线虫不同发育阶段转录组的研究有助于深入了解寄生虫的基因表达、调控和功能,这是理解其生物学特性以及与宿主和疾病相互作用的重要一步。本章(1)介绍一些具有社会经济重要性的关键寄生线虫的背景知识,(2)描述用于大规模研究这些寄生虫转录组和基因组的测序及生物信息学技术,(3)提供一些近期的应用实例,(4)强调利用这些技术对寄生虫进行基础生物学探索以开发对抗寄生虫病新干预措施的前景。