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本文引用的文献

1
PIP2 regulation of KCNQ channels: biophysical and molecular mechanisms for lipid modulation of voltage-dependent gating.磷脂酰肌醇-4,5-二磷酸(PIP2)对钾离子通道KCNQ的调控:脂质对电压依赖性门控调节的生物物理及分子机制
Front Physiol. 2014 May 27;5:195. doi: 10.3389/fphys.2014.00195. eCollection 2014.
2
All-atom empirical potential for molecular modeling and dynamics studies of proteins.蛋白质分子建模和动力学研究的全原子经验势。
J Phys Chem B. 1998 Apr 30;102(18):3586-616. doi: 10.1021/jp973084f.
3
Regulation of TRPV1 ion channel by phosphoinositide (4,5)-bisphosphate: the role of membrane asymmetry.TRPV1 离子通道受磷酸肌醇(4,5)-二磷酸的调节:膜不对称性的作用。
J Biol Chem. 2014 Apr 18;289(16):10999-11006. doi: 10.1074/jbc.M114.553180. Epub 2014 Mar 5.
4
TRPV1 structures in distinct conformations reveal activation mechanisms.不同构象的 TRPV1 结构揭示了其激活机制。
Nature. 2013 Dec 5;504(7478):113-8. doi: 10.1038/nature12823.
5
Structure of the TRPV1 ion channel determined by electron cryo-microscopy.电子冷冻显微镜解析 TRPV1 离子通道结构。
Nature. 2013 Dec 5;504(7478):107-12. doi: 10.1038/nature12822.
6
Dynamic PIP2 interactions with voltage sensor elements contribute to KCNQ2 channel gating.动态 PIP2 与电压传感器元件的相互作用有助于 KCNQ2 通道的门控。
Proc Natl Acad Sci U S A. 2013 Dec 10;110(50):20093-8. doi: 10.1073/pnas.1312483110. Epub 2013 Nov 25.
7
Promiscuous activation of transient receptor potential vanilloid 1 (TRPV1) channels by negatively charged intracellular lipids: the key role of endogenous phosphoinositides in maintaining channel activity.负电荷细胞内脂质对瞬时受体电位香草素 1(TRPV1)通道的非选择性激活:内源性磷酯酰肌醇在维持通道活性中的关键作用。
J Biol Chem. 2013 Dec 6;288(49):35003-13. doi: 10.1074/jbc.M113.520288. Epub 2013 Oct 24.
8
Phosphatidylinositol-4,5-biphosphate-dependent rearrangement of TRPV4 cytosolic tails enables channel activation by physiological stimuli.磷脂酰肌醇-4,5-二磷酸依赖性 TRPV4 胞质尾部重排使通道能够被生理刺激激活。
Proc Natl Acad Sci U S A. 2013 Jun 4;110(23):9553-8. doi: 10.1073/pnas.1220231110. Epub 2013 May 20.
9
TRPV1 channels are intrinsically heat sensitive and negatively regulated by phosphoinositide lipids.TRPV1 通道本质上对热敏感,并受磷酯酰肌醇脂质的负调控。
Neuron. 2013 Feb 20;77(4):667-79. doi: 10.1016/j.neuron.2012.12.016.
10
Bendix: intuitive helix geometry analysis and abstraction.本迪克斯:直观的螺旋几何分析和抽象。
Bioinformatics. 2012 Aug 15;28(16):2193-4. doi: 10.1093/bioinformatics/bts357. Epub 2012 Jun 23.

磷脂酰肌醇4,5-二磷酸(PI(4,5)P2)与瞬时受体电位香草酸亚型1(TRPV1)通道结合的分子决定因素。

Molecular determinants of phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) binding to transient receptor potential V1 (TRPV1) channels.

作者信息

Poblete Horacio, Oyarzún Ingrid, Olivero Pablo, Comer Jeffrey, Zuñiga Matías, Sepulveda Romina V, Báez-Nieto David, González Leon Carlos, González-Nilo Fernando, Latorre Ramón

机构信息

From the Center for Bioinformatics and Molecular Simulation, Universidad de Talca, 2 Norte 685, Talca-Chile.

Centro Interdisciplinario de Neurociencia de Valparaíso, Facultad de Ciencias, Universidad de Valparaíso, Valparaíso 2366103, Chile.

出版信息

J Biol Chem. 2015 Jan 23;290(4):2086-98. doi: 10.1074/jbc.M114.613620. Epub 2014 Nov 25.

DOI:10.1074/jbc.M114.613620
PMID:25425643
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4303662/
Abstract

Phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) has been recognized as an important activator of certain transient receptor potential (TRP) channels. More specifically, TRPV1 is a pain receptor activated by a wide range of stimuli. However, whether or not PI(4,5)P2 is a TRPV1 agonist remains open to debate. Utilizing a combined approach of mutagenesis and molecular modeling, we identified a PI(4,5)P2 binding site located between the TRP box and the S4-S5 linker. At this site, PI(4,5)P2 interacts with the amino acid residues Arg-575 and Arg-579 in the S4-S5 linker and with Lys-694 in the TRP box. We confirmed that PI(4,5)P2 behaves as a channel agonist and found that Arg-575, Arg-579, and Lys-694 mutations to alanine reduce PI(4,5)P2 binding affinity. Additionally, in silico mutations R575A, R579A, and K694A showed that the reduction in binding affinity results from the delocalization of PI(4,5)P2 in the binding pocket. Molecular dynamics simulations indicate that PI(4,5)P2 binding induces conformational rearrangements of the structure formed by S6 and the TRP domain, which cause an opening of the lower TRPV1 channel gate.

摘要

磷脂酰肌醇-4,5-二磷酸(PI(4,5)P2)已被公认为某些瞬时受体电位(TRP)通道的重要激活剂。更具体地说,TRPV1是一种可被多种刺激激活的疼痛感受器。然而,PI(4,5)P2是否为TRPV1激动剂仍存在争议。通过结合诱变和分子建模方法,我们确定了一个位于TRP框和S4-S5连接子之间的PI(4,5)P2结合位点。在该位点,PI(4,5)P2与S4-S5连接子中的精氨酸残基Arg-575和Arg-579以及TRP框中的赖氨酸残基Lys-694相互作用。我们证实PI(4,5)P2表现为通道激动剂,并发现将Arg-575、Arg-579和Lys-694突变为丙氨酸会降低PI(4,5)P2的结合亲和力。此外,计算机模拟的R575A、R579A和K694A突变表明,结合亲和力的降低是由于PI(4,5)P2在结合口袋中的离域化所致。分子动力学模拟表明,PI(4,5)P2结合诱导了由S6和TRP结构域形成的结构的构象重排,从而导致TRPV1通道下部门控的开放。