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气溶胶化土壤中肠出血性大肠杆菌 O157:H7 的暴发和环境菌株的适应性及其应激基因调控的克隆变异的关联。

Fitness of Outbreak and Environmental Strains of Escherichia coli O157:H7 in Aerosolizable Soil and Association of Clonal Variation in Stress Gene Regulation.

机构信息

Produce Safety and Microbiology Research Unit, United States Department of Agriculture, Agriculture Research Service, Western Regional Research Center, Albany, CA 94710, USA.

出版信息

Pathogens. 2014 Jun 30;3(3):528-48. doi: 10.3390/pathogens3030528.

DOI:10.3390/pathogens3030528
PMID:25438010
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4243427/
Abstract

Airborne dust from feedlots is a potential mechanism of contamination of nearby vegetable crops with Escherichia coli O157:H7 (EcO157). We compared the fitness of clinical and environmental strains of EcO157 in <45 µm soil from a spinach farm. Differences in survival were observed among the 35 strains with D-values (days for 90% decreases) ranging from 1-12 days. Strains that survived longer, generally, were from environmental sources and lacked expression of curli, a protein associated with attachment and virulence. Furthermore, the proportion of curli-positive (C+) variants of EcO157 strains decreased with repeated soil exposure and the strains that were curli-negative (C-) remained C- post-soil exposure. Soil exposure altered expression of stress-response genes linked to fitness of EcO157, but significant clonal variation in expression was measured. Mutations were detected in the stress-related sigma factor, rpoS, with a greater percentage occurring in parental strains of clinical origin prior to soil exposure. We speculate that these mutations in rpoS may confer a differential expression of genes, associated with mechanisms of survival and/or virulence, and thus may influence the fitness of EcO157.

摘要

来自饲养场的空气传播尘埃是附近种植的蔬菜作物被大肠杆菌 O157:H7(EcO157)污染的潜在机制。我们比较了来自菠菜农场的 <45 µm 土壤中临床和环境 EcO157 菌株的适应性。在 35 株菌株中观察到存活差异,D 值(降低 90%所需的天数)范围为 1-12 天。通常,存活时间较长的菌株来自环境来源,且缺乏卷曲蛋白(一种与附着和毒力相关的蛋白)的表达。此外,EcO157 菌株中卷曲阳性(C+)变体的比例随着土壤暴露的重复而降低,而卷曲阴性(C-)的菌株在土壤暴露后仍保持 C-。土壤暴露改变了与 EcO157 适应性相关的应激反应基因的表达,但在表达水平上存在显著的克隆变异。应激相关 sigma 因子 rpoS 中检测到突变,在土壤暴露前,来自临床来源的亲本菌株中发生的突变百分比更高。我们推测,rpoS 中的这些突变可能赋予与生存和/或毒力相关的基因的差异表达,从而可能影响 EcO157 的适应性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/920733618a72/pathogens-03-00528-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/9baf4c5a6a1c/pathogens-03-00528-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/ecb544a0e768/pathogens-03-00528-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/2f88bf6d4c64/pathogens-03-00528-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/920733618a72/pathogens-03-00528-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/9baf4c5a6a1c/pathogens-03-00528-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/ecb544a0e768/pathogens-03-00528-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/2f88bf6d4c64/pathogens-03-00528-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13c7/4243427/920733618a72/pathogens-03-00528-g004.jpg

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Appl Environ Microbiol. 2012 Jan;78(2):455-63. doi: 10.1128/AEM.06251-11. Epub 2011 Nov 11.
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Phenotypic diversity caused by differential RpoS activity among environmental Escherichia coli isolates.
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Tackling Drug Resistant Infection Outbreaks of Global Pandemic Escherichia coli ST131 Using Evolutionary and Epidemiological Genomics.运用进化与流行病学基因组学应对全球大流行的耐药性大肠杆菌ST131感染疫情
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