环境应激对大肠杆菌 O157:H7 串联重复稳定性的影响。
Effects of environmental stress on stability of tandem repeats in Escherichia coli O157:H7.
机构信息
Produce Safety and Microbiology Research Unit, USDA Agricultural Research Service, 800 Buchanan St., Albany, CA 94710, USA.
出版信息
Appl Environ Microbiol. 2010 May;76(10):3398-400. doi: 10.1128/AEM.02373-09. Epub 2010 Mar 26.
Abstract
Multilocus variable-number tandem-repeat analysis (MLVA) is used for source tracking Escherichia coli O157:H7 in agricultural environments. Tandem repeats were stable after limited replication but changed after exposure to irradiation, elevated temperatures, and starvation conditions. The pO157 plasmid was frequently lost under these stress conditions. Environmental stresses may increase phylogenetic diversity as measured by MLVA.
摘要
多位点可变数目串联重复分析（MLVA）用于追踪农业环境中的大肠杆菌 O157:H7。串联重复在有限的复制后是稳定的，但在暴露于辐射、高温和饥饿条件下会发生变化。在这些应激条件下，pO157 质粒经常丢失。环境应激可能会增加 MLVA 测量的系统发育多样性。
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本文引用的文献
1
Recombination frequency in plasmid DNA containing direct repeats--predictive correlation with repeat and intervening sequence length.
Plasmid. 2008 Sep;60(2):159-65. doi: 10.1016/j.plasmid.2008.06.004. Epub 2008 Aug 3.
2
Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation.
Nat Rev Genet. 2008 Aug;9(8):583-93. doi: 10.1038/nrg2398.
3
Incidence and tracking of Escherichia coli O157:H7 in a major produce production region in California.
PLoS One. 2007 Nov 14;2(11):e1159. doi: 10.1371/journal.pone.0001159.
4
Zinc regulates the stability of repetitive minisatellite DNA tracts during stationary phase.
Genetics. 2007 Dec;177(4):2469-79. doi: 10.1534/genetics.107.077636.
5
Evolutionary adaptation to freeze-thaw-growth cycles in Escherichia coli.
Physiol Biochem Zool. 2007 Jul-Aug;80(4):370-85. doi: 10.1086/518013. Epub 2007 May 7.
6
SOS repair and DNA supercoiling influence the genetic stability of DNA triplet repeats in Escherichia coli.
J Mol Biol. 2006 Dec 8;364(4):612-24. doi: 10.1016/j.jmb.2006.08.093. Epub 2006 Sep 7.
7
Transgeneration memory of stress in plants.
Nature. 2006 Aug 31;442(7106):1046-9. doi: 10.1038/nature05022. Epub 2006 Aug 6.
8
Effect of repeat copy number on variable-number tandem repeat mutations in Escherichia coli O157:H7.
J Bacteriol. 2006 Jun;188(12):4253-63. doi: 10.1128/JB.00001-06.
9
Fitness of human enteric pathogens on plants and implications for food safety.
Annu Rev Phytopathol. 2006;44:367-92. doi: 10.1146/annurev.phyto.44.070505.143359.
10
Second generation subtyping: a proposed PulseNet protocol for multiple-locus variable-number tandem repeat analysis of Shiga toxin-producing Escherichia coli O157 (STEC O157).
Foodborne Pathog Dis. 2006 Spring;3(1):118-31. doi: 10.1089/fpd.2006.3.118.
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