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SG2NA的组织特异性表达受可变剪接、RNA编辑和可变聚腺苷酸化调控。

Tissue specific expression of SG2NA is regulated by differential splicing, RNA editing and differential polyadenylation.

作者信息

Jain Buddhi Prakash, Chauhan Pooja, Tanti Goutam K, Singarapu Nandini, Ghaskadbi Surendra, Goswami Shyamal K

机构信息

School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India.

The University of Texas M.D. Anderson Cancer Center, Science Park, Department of Molecular Carcinogenesis, P.O. Box 389, Smithville, TX 78957, United States.

出版信息

Gene. 2015 Feb 10;556(2):119-26. doi: 10.1016/j.gene.2014.11.045. Epub 2014 Nov 22.

Abstract

SG2NA belongs to a three member Striatin subfamily of WD-40 repeat superfamily. It has multiple protein-protein interaction domains that are involved in the assembly of supra-molecular signaling complexes. Earlier we had demonstrated that there are at least five variants of SG2NA, generated by alternative splicing. We now demonstrate that a 52kDa novel variant is generated by the editing of the transcript for the 82kDa isoform. The 52kDa protein is abundant in mouse tissues but it is barely present in immortalized cells, suggesting its role in cell differentiation. Besides splicing and editing, expression of SG2NAs in tissues is also regulated by differential polyadenylation and mRNA/protein stability. Further, the longer UTR is seen only in the brain mRNA from 1month old mouse and 8-10day old chick embryo. Like alternative splicing, differential polyadenylation of Sg2na transcripts is also conserved in evolution. Taken together, these results suggest a highly versatile and dynamic mode of regulation of SG2NA with potential implications in tissue development.

摘要

SG2NA属于WD-40重复超家族的三成员striatin亚家族。它具有多个蛋白质-蛋白质相互作用结构域,参与超分子信号复合物的组装。我们之前已经证明,通过可变剪接产生了至少五种SG2NA变体。我们现在证明,一种52kDa的新型变体是由82kDa异构体的转录本编辑产生的。52kDa蛋白在小鼠组织中含量丰富,但在永生化细胞中几乎不存在,表明其在细胞分化中的作用。除了剪接和编辑外,SG2NA在组织中的表达还受差异多聚腺苷酸化和mRNA/蛋白质稳定性的调节。此外,仅在1月龄小鼠和8-10日龄鸡胚的脑mRNA中观察到较长的UTR。与可变剪接一样,Sg2na转录本的差异多聚腺苷酸化在进化中也具有保守性。综上所述,这些结果表明SG2NA具有高度通用和动态的调节模式,对组织发育具有潜在影响。

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