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地中海小斑猫鲨(Scyliorhinus canicula)的强大种群遗传结构和截然不同的种群历史。

Strong population genetic structure and contrasting demographic histories for the small-spotted catshark (Scyliorhinus canicula) in the Mediterranean Sea.

作者信息

Kousteni V, Kasapidis P, Kotoulas G, Megalofonou P

机构信息

Department of Zoology-Marine Biology, Faculty of Biology, University of Athens, Athens, Greece.

Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research (HCMR), Heraklion, Greece.

出版信息

Heredity (Edinb). 2015 Mar;114(3):333-43. doi: 10.1038/hdy.2014.107. Epub 2014 Dec 3.

Abstract

Coastal and demersal chondrichthyans, such as the small-spotted catshark, are expected to exhibit genetic differentiation in areas of complex geomorphology like the Mediterranean Basin because of their limited dispersal ability. To test this hypothesis, we used a fragment of the mitochondrial cytochrome c oxidase subunit I gene and 12 nuclear microsatellite loci in order to investigate the genetic structure and historical demography of this species, and to identify potential barriers to gene flow. Samples were collected from the Balearic Islands, the Algerian Basin, the Ionian Sea, the Corinthian Gulf and various locations across the Aegean Sea. Additional sequences from the Atlantic and the Levantine Basin retrieved from GenBank were included in the mitochondrial DNA analysis. Both mitochondrial and nuclear microsatellite DNA data revealed a strong genetic subdivision, mainly between the western and eastern Mediterranean, whereas the Levantine Basin shared haplotypes with both areas. The geographic isolation of the Mediterranean basins seems to enforce the population genetic differentiation of the species, with the deep sea acting as a strong barrier to its dispersal. Contrasting historical demographic patterns were also observed in different parts of the species' distribution, most notably a population growth trend in the western Mediterranean/Atlantic area and a slight decreasing one in the Aegean Sea. The different effects of the Pleistocene glacial periods on the habitat availability may explain the contrasting demographic patterns observed. The current findings suggest that the small-spotted catshark exhibits several genetic stocks in the Mediterranean, although further study is needed.

摘要

沿海和底层软骨鱼类,如小斑猫鲨,由于其扩散能力有限,预计会在地中海盆地等地形复杂的地区表现出遗传分化。为了验证这一假设,我们使用线粒体细胞色素c氧化酶亚基I基因的一个片段和12个核微卫星位点,以研究该物种的遗传结构和历史种群动态,并确定基因流动的潜在障碍。样本采集自巴利阿里群岛、阿尔及利亚盆地、爱奥尼亚海、科林斯湾以及爱琴海的各个地点。线粒体DNA分析还纳入了从GenBank检索到的来自大西洋和黎凡特盆地的其他序列。线粒体和核微卫星DNA数据均显示出强烈的遗传细分,主要存在于地中海西部和东部之间,而黎凡特盆地与这两个区域都共享单倍型。地中海盆地的地理隔离似乎加剧了该物种的种群遗传分化,深海成为其扩散的强大障碍。在该物种分布的不同区域也观察到了不同的历史种群动态模式,最显著的是地中海西部/大西洋区域的种群增长趋势以及爱琴海的略有下降趋势。更新世冰期对栖息地可用性的不同影响可能解释了所观察到的不同种群动态模式。目前的研究结果表明,小斑猫鲨在地中海表现出多个遗传种群,不过还需要进一步研究。

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