2014年在中国广东省导致仔猪严重腹泻疫情的变异猪流行性腹泻病毒毒株CH/GDZQ/2014的全基因组序列
Full-Length Genome Sequence of a Variant Porcine Epidemic Diarrhea Virus Strain, CH/GDZQ/2014, Responsible for a Severe Outbreak of Diarrhea in Piglets in Guangdong, China, 2014.
作者信息
Song Deping, Chen Yanjun, Peng Qi, Huang Dongyan, Zhang Tiansheng, Huang Tao, Zhang Fanfan, Zhou Xinrong, Tang Yuxin
机构信息
Department of Preventive Veterinary Medicine, College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang, Jiangxi, China.
Department of Preventive Veterinary Medicine, College of Animal Science and Technology, Jiangxi Agricultural University, Nanchang, Jiangxi, China
出版信息
Genome Announc. 2014 Dec 4;2(6):e01239-14. doi: 10.1128/genomeA.01239-14.
Abstract
The full-length genome sequence of a variant porcine epidemic diarrhea virus (PEDV) strain, CH/GDZQ/2014, was determined. The isolate was a variant strain with a relatively far relationship with the PEDV strains previously identified in the same area between 2011 and 2012 and was genetically distinct from the CV777-based vaccine strain currently being used in China.
摘要
测定了一株变异型猪流行性腹泻病毒（PEDV）毒株CH/GDZQ/2014的全基因组序列。该分离株是一个变异毒株，与2011年至2012年期间在同一地区先前鉴定的PEDV毒株关系相对较远，并且在基因上与中国目前正在使用的基于CV777的疫苗毒株不同。
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本文引用的文献
1
Whole-genome analysis of porcine epidemic diarrhea virus (PEDV) from eastern China.
Arch Virol. 2014 Oct;159(10):2777-85. doi: 10.1007/s00705-014-2102-7. Epub 2014 May 13.
2
New variant of porcine epidemic diarrhea virus, United States, 2014.
Emerg Infect Dis. 2014 May;20(5):917-9. doi: 10.3201/eid2005.140195.
3
Origin, evolution, and genotyping of emergent porcine epidemic diarrhea virus strains in the United States.
mBio. 2013 Oct 15;4(5):e00737-13. doi: 10.1128/mBio.00737-13.
4
Complete Genome Sequence of a Very Virulent Porcine Epidemic Diarrhea Virus Strain, CH/GDGZ/2012, Isolated in Southern China.
Genome Announc. 2013 Aug 22;1(4):e00645-13. doi: 10.1128/genomeA.00645-13.
5
Emergence of Porcine epidemic diarrhea virus in the United States: clinical signs, lesions, and viral genomic sequences.
J Vet Diagn Invest. 2013 Sep;25(5):649-54. doi: 10.1177/1040638713501675. Epub 2013 Aug 20.
6
Complete Genome Sequence of Porcine Epidemic Diarrhea Virus Strain USA/Colorado/2013 from the United States.
Genome Announc. 2013 Aug 8;1(4):e00555-13. doi: 10.1128/genomeA.00555-13.
7
Complete genome sequence of novel porcine epidemic diarrhea virus strain GD-1 in China.
J Virol. 2012 Dec;86(24):13824-5. doi: 10.1128/JVI.02615-12.
8
Phylogenetic analysis of porcine epidemic diarrhea virus field strains prevailing recently in China.
Arch Virol. 2013 Mar;158(3):711-5. doi: 10.1007/s00705-012-1541-2. Epub 2012 Nov 15.
9
Complete genome sequence of porcine epidemic diarrhea virus strain AJ1102 isolated from a suckling piglet with acute diarrhea in China.
J Virol. 2012 Oct;86(19):10910-1. doi: 10.1128/JVI.01919-12.
10
Complete genome sequence of a novel porcine epidemic diarrhea virus in south China.
J Virol. 2012 Sep;86(18):10248-9. doi: 10.1128/JVI.01589-12.
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