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使用代表性体积单元和有限元模拟研究局部弯曲对大电导机械敏感通道(MscL)门控的影响。

The effect of local bending on gating of MscL using a representative volume element and finite element simulation.

作者信息

Bavi Omid, Vossoughi Manouchehr, Naghdabadi Reza, Jamali Yousef

出版信息

Channels (Austin). 2014;8(4):344-9. doi: 10.4161/chan.29572.

Abstract

Many physiological processes such as cell division, endocytosis and exocytosis cause severe local curvature of the cell membrane. Local curvature has been shown experimentally to modulate numerous mechanosensitive (MS) ion channels. In order to quantify the effects of local curvature we introduced a coarse grain representative volume element for the bacterial mechanosensitive ion channel of large conductance (MscL) using continuum elasticity. Our model is designed to be consistent with the channel conformation in the closed and open states to capture its major continuum rheological behavior in response to the local membrane curvature. Herein we show that change in the local curvature of the lipid bilayer can modulate MscL activity considerably by changing both bilayer thickness and lateral pressure profile. Intriguingly, although bending in any direction results in almost the same free-energy cost, inward (cytoplasmic) bending favors channel opening, whereas outward (periplasmic) bending facilitates closing of the narrowest part of the MscL pore. This quantitative study using MscL as a model channel may have wide reaching consequences for the effect of local curvature on the physiological function of other types of prokaryotic and eukaryotic membrane proteins.

摘要

许多生理过程,如细胞分裂、胞吞作用和胞吐作用,都会导致细胞膜出现严重的局部曲率。实验表明,局部曲率可调节众多机械敏感(MS)离子通道。为了量化局部曲率的影响,我们使用连续介质弹性理论,为大电导细菌机械敏感离子通道(MscL)引入了一个粗粒度代表性体积元。我们的模型设计为与通道在关闭和开放状态下的构象一致,以捕捉其响应局部膜曲率的主要连续介质流变行为。在此我们表明,脂质双层局部曲率的变化可通过改变双层厚度和横向压力分布,显著调节MscL的活性。有趣的是,尽管在任何方向弯曲导致的自由能成本几乎相同,但向内(细胞质)弯曲有利于通道开放,而向外(周质)弯曲则促进MscL孔最窄部分的关闭。以MscL作为模型通道的这项定量研究,可能会对局部曲率对其他类型原核和真核膜蛋白生理功能的影响产生广泛影响。

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