Bavi Omid, Vossoughi Manouchehr, Naghdabadi Reza, Jamali Yousef
Institute for Nanoscience and Nanotechnology, Sharif University of Technology, Tehran, Iran.
Biochemical & Bioenvironmental Research Center (BBRC), Tehran, Iran.
PLoS One. 2016 Mar 9;11(3):e0150578. doi: 10.1371/journal.pone.0150578. eCollection 2016.
The hydrophobic mismatch between the lipid bilayer and integral membrane proteins has well-defined effect on mechanosensitive (MS) ion channels. Also, membrane local bending is suggested to modulate MS channel activity. Although a number of studies have already shown the significance of each individual factor, the combined effect of these physical factors on MS channel activity have not been investigated. Here using finite element simulation, we study the combined effect of hydrophobic mismatch and local bending on the archetypal mechanosensitive channel MscL. First we show how the local curvature direction impacts on MS channel modulation. In the case of MscL, we show inward (cytoplasmic) bending can more effectively gate the channel compared to outward bending. Then we indicate that in response to a specific local curvature, MscL inserted in a bilayer with the same hydrophobic length is more expanded in the constriction pore region compared to when there is a protein-lipid hydrophobic mismatch. Interestingly in the presence of a negative mismatch (thicker lipids), MscL constriction pore is more expanded than in the presence of positive mismatch (thinner lipids) in response to an identical membrane curvature. These results were confirmed by a parametric energetic calculation provided for MscL gating. These findings have several biophysical consequences for understanding the function of MS channels in response to two major physical stimuli in mechanobiology, namely hydrophobic mismatch and local membrane curvature.
脂质双层与整合膜蛋白之间的疏水不匹配对机械敏感(MS)离子通道具有明确的影响。此外,膜的局部弯曲被认为可调节MS通道活性。尽管许多研究已经表明了各个因素的重要性,但尚未研究这些物理因素对MS通道活性的综合影响。在这里,我们使用有限元模拟来研究疏水不匹配和局部弯曲对典型机械敏感通道MscL的综合影响。首先,我们展示了局部曲率方向如何影响MS通道的调节。对于MscL,我们发现与向外弯曲相比,向内(细胞质)弯曲能更有效地开启通道。然后我们指出,响应特定的局部曲率,插入具有相同疏水长度的双层中的MscL在收缩孔区域比存在蛋白质 - 脂质疏水不匹配时更扩张。有趣的是,在存在负不匹配(脂质更厚)的情况下,响应相同膜曲率时,MscL收缩孔比存在正不匹配(脂质更薄)时更扩张。这些结果通过为MscL门控提供的参数能量计算得到证实。这些发现对于理解MS通道在机械生物学中对两种主要物理刺激(即疏水不匹配和局部膜曲率)的响应功能具有若干生物物理意义。