Levin Albert M, Adrianto Indra, Datta Indrani, Iannuzzi Michael C, Trudeau Sheri, Li Jia, Drake Wonder P, Montgomery Courtney G, Rybicki Benjamin A
1 Department of Public Health Sciences and.
2 Center for Bioinformatics, Henry Ford Health System, Detroit, Michigan.
Am J Respir Cell Mol Biol. 2015 Aug;53(2):206-16. doi: 10.1165/rcmb.2014-0227OC.
HLA-DRB1 is a sarcoidosis risk gene, and the *03:01 allele is strongly associated with disease resolution in European sarcoidosis cases. Whereas the HLA-DRB1 variation is associated with sarcoidosis susceptibility in African Americans, DRB1 risk alleles are not as well defined, and associations with disease resolution have not been studied. Associations between genotyped and imputed HLA-DRB1 alleles and disease susceptibility/resolution were evaluated in a sample of 1,277 African-American patients with sarcoidosis and 1,467 control subjects. In silico binding assays were performed to assess the functional significance of the associated alleles. Increased disease susceptibility was associated with the HLA-DRB1 alleles *12:01 (odds ratio [OR], 2.11; 95% confidence interval [CI], 1.65-2.69; P = 3.2 × 10(-9)) and *11:01 (OR, 1.69; 95% CI, 1.42-2.01; P = 3.0 × 10(-9)). The strongest protective association was found with 03:01 (OR, 0.56; 95% CI, 0.44-0.73; P = 1.0 × 10(-5)). The African-derived allele 03:02 was associated with decreased risk of persistent radiographic disease (OR, 0.52; 95% CI, 0.37-0.72; P = 1.3 × 10(-4)), a finding consistent across the three component studies comprising the analytic sample. The DRB103:01 association with disease persistence was dependent upon local ancestry, with carriers of at least one European allele at DRB1 at a decreased risk of persistent disease (OR, 0.36; 95% CI, 0.14-0.94; P = 0.037). Results of in silico binding analyses showed that DRB103:01 consistently demonstrated the highest binding affinities for six bacterial peptides previously found in sarcoidosis granulomas, whereas 12:01 displayed the lowest binding affinities. This study has identified DRB103:01 and 03:02 as novel alleles associated with disease susceptibility and course in African Americans. Further investigation of DRB103 alleles may uncover immunologic factors that favor sarcoidosis protection and resolution among African Americans.
HLA - DRB1是结节病的一个风险基因,03:01等位基因与欧洲结节病病例的疾病缓解密切相关。虽然HLA - DRB1变异与非裔美国人的结节病易感性有关,但DRB1风险等位基因尚未明确界定,且与疾病缓解的关联也未得到研究。在1277例非裔美国结节病患者和1467例对照受试者的样本中,评估了基因分型和推断的HLA - DRB1等位基因与疾病易感性/缓解之间的关联。进行了计算机模拟结合试验以评估相关等位基因的功能意义。疾病易感性增加与HLA - DRB1等位基因12:01(优势比[OR],2.11;95%置信区间[CI],1.65 - 2.69;P = 3.2×10(-9))和11:01(OR,1.69;95% CI,1.42 - 2.01;P = 3.0×10(-9))相关。发现与03:01的最强保护关联(OR,0.56;95% CI,0.44 - 0.73;P = 1.0×10(-5))。非洲来源的等位基因03:02与持续性放射学疾病风险降低相关(OR,0.52;95% CI,0.37 - 0.72;P = 1.3×10(-4)),这一发现在构成分析样本的三项组成研究中是一致的。DRB103:01与疾病持续性的关联取决于局部血统,DRB1至少携带一个欧洲等位基因的携带者持续性疾病风险降低(OR,0.36;95% CI,0.14 - 0.94;P = 0.037)。计算机模拟结合分析结果表明,DRB103:01始终显示出对先前在结节病肉芽肿中发现的六种细菌肽具有最高的结合亲和力,而12:01显示出最低的结合亲和力。本研究已确定DRB103:01和03:02是与非裔美国人疾病易感性和病程相关的新等位基因。对DRB1*03等位基因的进一步研究可能会揭示有利于非裔美国人结节病保护和缓解的免疫因素。