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小角溶液散射在结构生物学中的新兴应用。

Emerging applications of small angle solution scattering in structural biology.

作者信息

Chaudhuri Barnali N

机构信息

Faculty of Life Sciences and Biotechnology, South Asian University, Akbar Bhawan, Chanakyapuri, New Delhi, India.

出版信息

Protein Sci. 2015 Mar;24(3):267-76. doi: 10.1002/pro.2624. Epub 2015 Feb 12.

Abstract

Small angle solution X-ray and neutron scattering recently resurfaced as powerful tools to address an array of biological problems including folding, intrinsic disorder, conformational transitions, macromolecular crowding, and self or hetero-assembling of biomacromolecules. In addition, small angle solution scattering complements crystallography, nuclear magnetic resonance spectroscopy, and other structural methods to aid in the structure determinations of multidomain or multicomponent proteins or nucleoprotein assemblies. Neutron scattering with hydrogen/deuterium contrast variation, or X-ray scattering with sucrose contrast variation to a certain extent, is a convenient tool for characterizing the organizations of two-component systems such as a nucleoprotein or a lipid-protein assembly. Time-resolved small and wide-angle solution scattering to study biological processes in real time, and the use of localized heavy-atom labeling and anomalous solution scattering for applications as FRET-like molecular rulers, are amongst promising newer developments. Despite the challenges in data analysis and interpretation, these X-ray/neutron solution scattering based approaches hold great promise for understanding a wide variety of complex processes prevalent in the biological milieu.

摘要

小角溶液X射线和中子散射最近重新成为解决一系列生物学问题的强大工具,这些问题包括折叠、内在无序、构象转变、大分子拥挤以及生物大分子的自组装或异组装。此外,小角溶液散射可补充晶体学、核磁共振光谱学和其他结构方法,以辅助确定多结构域或多组分蛋白质或核蛋白组装体的结构。利用氢/氘对比度变化的中子散射,或在一定程度上利用蔗糖对比度变化的X射线散射,是表征核蛋白或脂蛋白组装体等二元系统组织的便捷工具。用于实时研究生物过程的时间分辨小角和广角溶液散射,以及将局部重原子标记和反常溶液散射用作类似FRET的分子尺的应用,是有前景的新进展。尽管在数据分析和解释方面存在挑战,但这些基于X射线/中子溶液散射的方法在理解生物环境中普遍存在的各种复杂过程方面具有很大潜力。

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, a program for rapid shape determination in small-angle scattering.用于小角散射中快速形状测定的一个程序。
J Appl Crystallogr. 2009 Apr 1;42(Pt 2):342-346. doi: 10.1107/S0021889809000338. Epub 2009 Jan 24.
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New developments in the program package for small-angle scattering data analysis.小角散射数据分析程序包的新进展。
J Appl Crystallogr. 2012 Mar 15;45(Pt 2):342-350. doi: 10.1107/S0021889812007662. eCollection 2012 Apr 1.
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Using small angle solution scattering data in Xplor-NIH structure calculations.在Xplor-NIH结构计算中使用小角溶液散射数据。
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