从深海水中分离出的食油假单胞菌菌株MGY01的基因组序列草图
Draft genome sequence of Pseudomonas oleovorans strain MGY01 isolated from deep sea water.
作者信息
Wang Runping, Ren Chong, Huang Nan, Liu Yang, Zeng Runying
机构信息
China Shool of Marine Sciences, Ningbo University, Ningbo 315211, China; State Key Laboratory Breeding Base of Marine Genetic Resource, Third Institute of Oceanography, SOA, Xiamen 361005, China.
China Shipbuilding Industry Corporation (CSIC), No. 710 Institute, China.
出版信息
Mar Genomics. 2015 Apr;20:17-8. doi: 10.1016/j.margen.2014.12.003. Epub 2014 Dec 17.
Pseudomonas oleovorans MGY01 isolated from the deep-sea water of the South China Sea could effectively degrade malachite green. The draft genome of P. oleovorans MGY01 was sequenced and analyzed to gain insights into its efficient metabolic pathway for degrading malachite green. The data obtained revealed 109 Contigs (N50; 128,269 bp) with whole genome size of 5,201,892 bp. The draft genome sequence of strain MGY01 will be helpful in studying the genetic pathways involved in the degradation of malachite green.
从中国南海深海海水中分离出的食油假单胞菌MGY01能够有效降解孔雀石绿。对食油假单胞菌MGY01的基因组草图进行了测序和分析，以深入了解其降解孔雀石绿的高效代谢途径。获得的数据显示有109个重叠群（N50；128,269 bp），全基因组大小为5,201,892 bp。菌株MGY01的基因组草图序列将有助于研究参与孔雀石绿降解的遗传途径。
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