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磷酸化调控RNA结合蛋白的结构基础。

Structural basis for regulation of RNA-binding proteins by phosphorylation.

作者信息

Thapar Roopa

机构信息

BioSciences at Rice, Biochemistry and Cell Biology, Rice University, Houston, Texas 77251-1892, United States.

出版信息

ACS Chem Biol. 2015 Mar 20;10(3):652-66. doi: 10.1021/cb500860x. Epub 2015 Jan 14.

DOI:10.1021/cb500860x
PMID:25535763
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4372107/
Abstract

Ribonucleoprotein complexes involved in pre-mRNA splicing and mRNA decay are often regulated by phosphorylation of RNA-binding proteins. Cells use phosphorylation-dependent signaling pathways to turn on and off gene expression. Not much is known about how phosphorylation-dependent signals transmitted by exogenous factors or cell cycle checkpoints regulate RNA-mediated gene expression at the atomic level. Several human diseases are linked to an altered phosphorylation state of an RNA binding protein. Understanding the structural response to the phosphorylation "signal" and its effect on ribonucleoprotein assembly provides mechanistic understanding, as well as new information for the design of novel drugs. In this review, I highlight recent structural studies that reveal the mechanisms by which phosphorylation can regulate protein-protein and protein-RNA interactions in ribonucleoprotein complexes.

摘要

参与前体mRNA剪接和mRNA降解的核糖核蛋白复合物通常受RNA结合蛋白磷酸化的调控。细胞利用磷酸化依赖性信号通路来开启和关闭基因表达。关于外源性因子或细胞周期检查点传递的磷酸化依赖性信号如何在原子水平上调节RNA介导的基因表达,目前所知甚少。几种人类疾病与RNA结合蛋白磷酸化状态的改变有关。了解对磷酸化“信号”的结构反应及其对核糖核蛋白组装的影响,不仅能提供机制上的理解,还能为新型药物的设计提供新信息。在这篇综述中,我重点介绍了最近的结构研究,这些研究揭示了磷酸化调节核糖核蛋白复合物中蛋白质-蛋白质和蛋白质-RNA相互作用的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/e58124a95dc4/cb-2014-00860x_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/75a37914c999/cb-2014-00860x_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/b9263862a324/cb-2014-00860x_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/107760cf6814/cb-2014-00860x_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/e58124a95dc4/cb-2014-00860x_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/75a37914c999/cb-2014-00860x_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/b9263862a324/cb-2014-00860x_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/107760cf6814/cb-2014-00860x_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/958a/4372107/e58124a95dc4/cb-2014-00860x_0002.jpg

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本文引用的文献

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Nature. 2015 Mar 5;519(7541):106-9. doi: 10.1038/nature13999. Epub 2014 Dec 22.
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Contribution of protein phosphorylation to binding-induced folding of the SLBP-histone mRNA complex probed by phosphorus-31 NMR.通过磷-31 NMR 探测蛋白质磷酸化对 SLBP-组蛋白 mRNA 复合物结合诱导折叠的贡献。
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CstF64: cell cycle regulation and functional role in 3' end processing of replication-dependent histone mRNAs.
富含丝氨酸/精氨酸的剪接因子1的精氨酸去甲基化增强了胰腺导管腺癌细胞衍生的小细胞外囊泡中的miRNA富集。
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Alternative Splicing in the Heart: The Therapeutic Potential of Regulating the Regulators.心脏中的可变剪接:调控调控因子的治疗潜力
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KIS counteracts PTBP2 and regulates alternative exon usage in neurons.KIS可对抗PTBP2并调节神经元中的可变外显子使用。
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Phosphorylation of the compartmentalized PKA substrate TAF15 regulates RNA-protein interactions.磷酸化区室化的 PKA 底物 TAF15 调节 RNA-蛋白相互作用。
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A cyclin D1 intrinsically disordered domain accesses modified histone motifs to govern gene transcription.细胞周期蛋白D1的内在无序结构域可识别修饰后的组蛋白基序以调控基因转录。
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Development and Applications of Chimera Platforms for Tyrosine Phosphorylation.用于酪氨酸磷酸化的嵌合体平台的开发与应用
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