Forrester Steven J, Kawata Keisuke, Lee Hojun, Kim Ji-Seok, Sebzda Kelly, Butler Tiffiny, Yingling Vanessa R, Park Joon-Young
Cardiovascular Genomics Laboratory, Department of Kinesiology, College of Public Health, Temple University, Philadelphia, Pennsylvania.
Department of Kinesiology, California State University, East BayHayward, California.
Physiol Rep. 2014 Dec 24;2(12). doi: 10.14814/phy2.12255. Print 2014 Dec 1.
Aging is associated with increasing incidence of osteoporosis; a skeletal disorder characterized by compromised bone strength that may predispose patients to an increased risk of fracture. It is imperative to identify novel ways in which to attenuate such declines in the functional properties of bone. The purpose of this study was to identify, through in silico, in vitro, and in vivo approaches, a protein secreted from skeletal muscle that is putatively involved in bone formation. We performed a functional annotation bioinformatic analysis of human skeletal muscle-derived secretomes (n = 319) using DAVID software. Cross-referencing was conducted using OMIM, Unigene, UniProt, GEO, and CGAP databases. Signal peptides and transmembrane residues were analyzed using SignalP and TMHMM software. To further investigate functionality of the identified protein, L6 and C2C12 myotubes were grown for in vitro analysis. C2C12 myotubes were subjected to 16 h of glucose deprivation (GD) prior to analysis. In vivo experiments included analysis of 6-week calorie restricted (CR) rat muscle samples. Bioinformatic analysis yielded 15 genes of interest. GEO dataset analysis identified BMP5, COL1A2, CTGF, MGP, MMP2, and SPARC as potential targets for further processing. Following TMHMM and SignalP processing, CTGF was chosen as a candidate gene. CTGF expression level was increased during L6 myoblast differentiation (P < 0.01). C2C12 myotubes showed no change in response to GD. Rat soleus muscle samples exhibited an increase in CTGF expression (n = 16) in response to CR (35%) (P < 0.05). CTGF was identified as a skeletal muscle expressed protein through bioinformatic analysis of skeletal muscle-derived secretomes and in vitro/in vivo analysis. Future study is needed to determine the role of muscle-derived CTGF in bone formation and remodeling processes.
衰老与骨质疏松症发病率的增加相关;骨质疏松症是一种骨骼疾病,其特征是骨强度受损,这可能使患者面临骨折风险增加的情况。确定减轻骨骼功能特性此类下降的新方法势在必行。本研究的目的是通过计算机模拟、体外和体内方法,鉴定一种假定参与骨形成的骨骼肌分泌蛋白。我们使用DAVID软件对人骨骼肌来源的分泌组(n = 319)进行了功能注释生物信息学分析。使用OMIM、Unigene、UniProt、GEO和CGAP数据库进行交叉引用。使用SignalP和TMHMM软件分析信号肽和跨膜残基。为了进一步研究鉴定出的蛋白质的功能,培养L6和C2C12肌管用于体外分析。在分析之前,将C2C12肌管进行16小时的葡萄糖剥夺(GD)处理。体内实验包括对6周热量限制(CR)大鼠肌肉样本的分析。生物信息学分析产生了15个感兴趣的基因。GEO数据集分析确定BMP5、COL1A2、CTGF、MGP、MMP2和SPARC为进一步研究的潜在靶点。经过TMHMM和SignalP处理后,选择CTGF作为候选基因。CTGF表达水平在L6成肌细胞分化过程中升高(P < 0.01)。C2C12肌管对GD无反应变化。大鼠比目鱼肌样本对CR的反应显示CTGF表达增加(n = 16)(35%)(P < 0.05)。通过对骨骼肌来源的分泌组进行生物信息学分析以及体外/体内分析,CTGF被鉴定为一种骨骼肌表达蛋白。需要进一步研究来确定肌肉来源的CTGF在骨形成和重塑过程中的作用。