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琼脂糖凝胶上DNA嵌入溴化乙锭的定量荧光

Quantitative fluorescence of DNA-intercalated ethidium bromide on agarose gels.

作者信息

Ribeiro E A, Larcom L L, Miller D P

机构信息

Department of Physics, Clemson University, South Carolina 29634-1911.

出版信息

Anal Biochem. 1989 Sep;181(2):197-208. doi: 10.1016/0003-2697(89)90229-7.

DOI:10.1016/0003-2697(89)90229-7
PMID:2554760
Abstract

Techniques for analyzing DNA distributions on agarose gels are examined by both two-dimensional and one-dimensional methods. It is demonstrated that very large errors in DNA concentration occur in such analyses unless (i) the electrophoresis is performed in a careful, reproducible manner, (ii) the films are calibrated with an internal standard, (iii) high resolution densitometry is used for analyzing the films, and (iv) appropriate background controls are used to determine the baselines for integration. Two-dimensional scanning produces more accurate results than one-dimensional scanning, but in cases where the bands are relatively uniform, the one-dimensional analysis gives good results. A technique for determining accurate distributions is described.

摘要

通过二维和一维方法研究了分析琼脂糖凝胶上DNA分布的技术。结果表明,除非满足以下条件,否则此类分析中DNA浓度会出现非常大的误差:(i)以仔细、可重复的方式进行电泳;(ii)用内标对胶片进行校准;(iii)使用高分辨率光密度计分析胶片;(iv)使用适当的背景对照来确定积分基线。二维扫描比一维扫描产生更准确的结果,但在条带相对均匀的情况下,一维分析也能给出较好的结果。本文描述了一种确定准确分布的技术。

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1
Quantitative fluorescence of DNA-intercalated ethidium bromide on agarose gels.琼脂糖凝胶上DNA嵌入溴化乙锭的定量荧光
Anal Biochem. 1989 Sep;181(2):197-208. doi: 10.1016/0003-2697(89)90229-7.
2
Comparison of ethidium bromide and 4'6-diamidino-2-phenylindole as quantitative fluorescent stains for DNA in agarose gels.溴化乙锭与4',6-二脒基-2-苯基吲哚作为琼脂糖凝胶中DNA定量荧光染色剂的比较。
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Quantification of circular DNA breakage by fluorescence scanning of ethidium bromide-stained horizontal gels: application to the effect of intercalating agents.
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Quantitation of ethidium-stained closed circular DNA in agarose gels.琼脂糖凝胶中溴化乙锭染色的闭环DNA定量分析。
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Quantitation of specific fragments in DNA restriction digests: application to the cohesive fragments in lambda DNA digests.DNA限制性酶切片段的定量分析:应用于λ噬菌体DNA酶切产生的粘性末端片段
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Method to reduce the quantity of ethidium bromide required to stain DNA in agarose gels.减少琼脂糖凝胶中用于DNA染色所需溴化乙锭量的方法。
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Densitometric determination of human papillomavirus DNA quantities by chromato-scanning in the fluorescence mode.通过荧光模式下的色谱扫描进行人乳头瘤病毒DNA量的密度测定。
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Mapping of closed circular DNAs by cleavage with restriction endonucleases and calibration by agarose gel electrophoresis.通过限制性内切核酸酶切割对闭环DNA进行图谱分析以及通过琼脂糖凝胶电泳进行校准。
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