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通过对smcL基因进行环介导等温扩增快速灵敏地检测绵羊李斯特菌

Rapid and sensitive detection of Listeria ivanovii by loop-mediated isothermal amplification of the smcL gene.

作者信息

Wang Yi, Wang Yan, Xu Huaqing, Dai Hang, Meng Shuang, Ye Changyun

机构信息

State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, China CDC, Changbai Road 155, Changping, Beijing, 102206, PR China, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou, PR China.

Guiyang Medical University, Guiyang, PR China.

出版信息

PLoS One. 2014 Dec 30;9(12):e115868. doi: 10.1371/journal.pone.0115868. eCollection 2014.

Abstract

A loop-mediated isothermal amplification (LAMP) assay for rapid and sensitive detection of the L. ivanovii strains had been developed and evaluated in this study. Oligonucleotide primers specific for L. ivanovii species were designed corresponding to smcL gene sequences. The primers set comprise six primers targeting eight regions on the species-specific gene smcL. The LAMP assay could be completed within 1 h at 64°C in a water bath. Amplification products were directly observed by the Loopamp Fluorescent Detection Reagent (FD) or detected by agarose gel electrophoresis. Moreover, the LAMP reactions were also detected by real-time measurement of turbidity. The exclusivity of 77 non-L. ivanovii and the inclusivity of 17 L. ivanovii were both 100% in the assay. Sensitivity of the LAMP assay was 250 fg DNA and 16 CFU per reaction for detection of L. ivanovii in pure cultures and simulated human stool. The LAMP assay was 10 and 100-fold more sensitive than quantitative PCR (qPCR) and conventional PCR assays,respectively. When applied to human stool samples spiked with low level (8 CFU/0.5 g) of L. ivanovii strains, the new LAMP assay described here achieved positive detection after 6 hours enrichment. In conclusion, the new LAMP assay in this study can be used as a valuable, rapid and sensitive detection tool for the detection of L. ivanovii in field, medical and veterinary laboratories.

摘要

本研究开发并评估了一种用于快速灵敏检测伊凡诺夫李斯特菌菌株的环介导等温扩增(LAMP)检测方法。针对伊凡诺夫李斯特菌物种设计了与smcL基因序列对应的寡核苷酸引物。该引物组包含靶向物种特异性基因smcL上8个区域的6条引物。LAMP检测可在64℃水浴中1小时内完成。扩增产物可通过环介导等温扩增荧光检测试剂(FD)直接观察或通过琼脂糖凝胶电泳检测。此外,还通过实时测量浊度来检测LAMP反应。在该检测中,77株非伊凡诺夫李斯特菌的特异性和17株伊凡诺夫李斯特菌的包容性均为100%。LAMP检测在纯培养物和模拟人粪便中检测伊凡诺夫李斯特菌的灵敏度分别为每个反应250 fg DNA和16 CFU。LAMP检测分别比定量PCR(qPCR)和传统PCR检测灵敏10倍和100倍。当应用于添加低水平(8 CFU/0.5 g)伊凡诺夫李斯特菌菌株的人粪便样本时,此处描述的新型LAMP检测在富集6小时后实现了阳性检测。总之,本研究中的新型LAMP检测可作为一种有价值、快速且灵敏的检测工具,用于在现场、医学和兽医实验室检测伊凡诺夫李斯特菌。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5995/4280119/3c4cdd8571ba/pone.0115868.g001.jpg

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