Bennett James T, Vasta Valeria, Zhang Min, Narayanan Jaya, Gerrits Peter, Hahn Si Houn
Department of Pediatrics, University of Washington School of Medicine, Seattle Children's Hospital, Seattle, WA 98105, USA.
Department of Pediatric Endocrinology, Beaumont Children's Hospital, Royal Oak, MI 48073, USA.
Mol Genet Metab. 2015 Mar;114(3):451-8. doi: 10.1016/j.ymgme.2014.12.304. Epub 2014 Dec 20.
Genetic sequencing has become a critical part of the diagnosis of certain forms of pancreatic beta cell dysfunction. Despite great advances in the speed and cost of DNA sequencing, determining the pathogenicity of variants remains a challenge, and requires sharing of sequence and phenotypic data between laboratories. We reviewed all diabetes and hyperinsulinism-associated molecular testing done at the Seattle Children's Molecular Genetics Laboratory from 2009 to 2013. 331 probands were referred to us for molecular genetic sequencing for Neonatal Diabetes (NDM), Maturity-Onset Diabetes of the Young (MODY), or Congenital Hyperinsulinism (CHI) during this period. Reportable variants were identified in 115 (35%) patients with 91 variants in one of 6 genes: HNF1A, GCK, HNF4A, ABCC8, KCNJ11, or INS. In addition to identifying 23 novel variants, we identified unusual mechanisms of inheritance, including mosaic and digenic MODY presentations. Re-analysis of all reported variants using more recently available databases led to a change in variant interpretation from the original report in 30% of cases. These results represent a resource for molecular testing of monogenic forms of diabetes and hyperinsulinism, providing a mutation spectrum for these disorders in a large North American cohort. In addition, they highlight the importance of periodic review of molecular testing results.
基因测序已成为某些形式的胰腺β细胞功能障碍诊断的关键部分。尽管DNA测序在速度和成本方面取得了巨大进展,但确定变异的致病性仍然是一项挑战,并且需要实验室之间共享序列和表型数据。我们回顾了2009年至2013年在西雅图儿童分子遗传学实验室进行的所有与糖尿病和高胰岛素血症相关的分子检测。在此期间,有331名先证者因新生儿糖尿病(NDM)、青年发病的成年型糖尿病(MODY)或先天性高胰岛素血症(CHI)被转诊至我们实验室进行分子遗传测序。在115名(35%)患者中鉴定出可报告的变异,这些变异存在于6个基因之一中的91个变异中:肝细胞核因子1α(HNF1A)、葡萄糖激酶(GCK)、肝细胞核因子4α(HNF4A)、ATP结合盒转运体C8(ABCC8)、内向整流钾离子通道蛋白11(KCNJ11)或胰岛素(INS)。除了鉴定出23个新变异外,我们还发现了不寻常的遗传机制,包括嵌合和双基因MODY表现。使用更新的可用数据库对所有报告的变异进行重新分析,导致30%的病例中变异解释与原始报告有所不同。这些结果代表了单基因形式糖尿病和高胰岛素血症分子检测的一种资源,为北美一个大型队列中的这些疾病提供了突变谱。此外,它们突出了定期审查分子检测结果的重要性。