Moskalev Evgeny A, Jandaghi Pouria, Fallah Mahdi, Manoochehri Mehdi, Botla Sandeep K, Kolychev Oleg V, Nikitin Evgeny A, Bubnov Vladymyr V, von Knebel Doeberitz M, Strobel Oliver, Hackert Thilo, Büchler Markus W, Giese Nathalia, Bauer Andrea, Muley Thomas, Warth Arne, Schirmacher Peter, Haller Florian, Hoheisel Jörg D, Riazalhosseini Yasser
Functional Genome Analysis, Deutsches Krebsforschungszentrum (DKFZ), Heidelberg, Germany.
Diagnostic Molecular Pathology, Institute of Pathology, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen, Germany.
Oncotarget. 2015 Feb 28;6(6):4418-27. doi: 10.18632/oncotarget.2759.
Identification of a single molecular trait that is determinant of common malignancies may serve as a powerful diagnostic supplement to cancer type-specific markers. Here, we report a DNA methylation mark that is characteristic of seven studied malignancies, namely cancers of lung, breast, prostate, pancreas, colorectum, glioblastoma and B cell chronic lymphocytic leukaemia (CLL) (n = 137). This mark was defined by substantial hypermethylation at the promoter and first exon of growth hormone secretagouge receptor (GHSR) through bisulfite pyrosequencing. The degree of aberrant methylation was capable of accurate discrimination between cancer and control samples. The highest sensitivity and specificity of cancer detection was achieved for cancers of pancreas, lung, breast and CLL yielding the area under the curve (AUC) values of 1.0000, 0.9952, 0.9800 and 0.9400, respectively. Narrowing to a single CpG site within the gene's promoter or four consecutive CpG units of the highest methylation levels within the first exon improved the detection power. GHSR hypermethylation was detected already at the early stage tumors. The accurate performance of this marker was further replicated in an independent set of pancreatic cancer and control samples (n = 78). These findings support the candidature of GHSR methylation as a highly accurate pan-cancer marker.
鉴定出一种决定常见恶性肿瘤的单一分子特征,可作为癌症类型特异性标志物的有力诊断补充。在此,我们报告一种DNA甲基化标记,它是七种研究的恶性肿瘤的特征,即肺癌、乳腺癌、前列腺癌、胰腺癌、结直肠癌、胶质母细胞瘤和B细胞慢性淋巴细胞白血病(CLL)(n = 137)。通过亚硫酸氢盐焦磷酸测序,该标记由生长激素促分泌素受体(GHSR)启动子和第一外显子的大量高甲基化定义。异常甲基化程度能够准确区分癌症样本和对照样本。对于胰腺癌、肺癌、乳腺癌和CLL,癌症检测的灵敏度和特异性最高,曲线下面积(AUC)值分别为1.0000、0.9952、0.9800和0.9400。缩小到基因启动子内的单个CpG位点或第一外显子内甲基化水平最高的四个连续CpG单元可提高检测能力。在早期肿瘤中已检测到GHSR高甲基化。该标志物的准确性能在一组独立的胰腺癌和对照样本(n = 78)中得到进一步验证。这些发现支持GHSR甲基化作为一种高度准确的泛癌标志物的候选资格。