Fletcher Olivia, Dudbridge Frank
Breakthrough Breast Cancer Research Centre, The Institute of Cancer Research, London, SW3 6JB, UK.
Division of Breast Cancer Research, The Institute of Cancer Research, London, SW3 6JB, UK.
BMC Med. 2014 Oct 17;12:195. doi: 10.1186/s12916-014-0195-1.
Gene-environment interactions have the potential to shed light on biological processes leading to disease, identify individuals for whom risk factors are most relevant, and improve the accuracy of epidemiological risk models. We review the progress that has been made in investigating gene-environment interactions in the field of breast cancer. Although several large-scale analyses have been carried out, only a few significant interactions have been reported. One of these, an interaction between CASP8-rs1045485 and alcohol consumption has been replicated, but others have not, including LSP1- rs3817198 and parity, and 1p11.2-rs11249433 and ever being parous. False positive interactions may arise if the gene and environment are correlated and the causal variant is less frequent than the tag SNP. We conclude that while much progress has been made in this area it is still too soon to tell whether gene-environment interactions will fulfil their promise. Before we can make this assessment we will need to replicate (or refute) the reported interactions, identify the causal variants that underlie tag-SNP associations and validate the next generation of epidemiological risk models.
基因-环境相互作用有可能揭示导致疾病的生物学过程,识别那些风险因素最为相关的个体,并提高流行病学风险模型的准确性。我们回顾了在乳腺癌领域研究基因-环境相互作用方面所取得的进展。尽管已经进行了几项大规模分析,但仅报道了少数显著的相互作用。其中之一,即半胱天冬酶8基因(CASP8)的单核苷酸多态性rs1045485与饮酒之间的相互作用已得到重复验证,但其他相互作用尚未得到重复验证,包括淋巴细胞特异性蛋白1基因(LSP1)的单核苷酸多态性rs3817198与生育次数,以及1p11.2区域的单核苷酸多态性rs11249433与曾经生育。如果基因与环境相关且因果变异比标签单核苷酸多态性的频率更低,可能会出现假阳性相互作用。我们得出结论,虽然在这一领域已取得很大进展,但现在判断基因-环境相互作用是否会实现其前景还为时过早。在我们能够做出这一评估之前,我们需要重复(或反驳)已报道的相互作用,识别标签单核苷酸多态性关联背后的因果变异,并验证下一代流行病学风险模型。