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莱茵衣藻人工成熟的[FeFe]氢化酶:非天然H-簇的HYSCORE和ENDOR研究

Artificially maturated [FeFe] hydrogenase from Chlamydomonas reinhardtii: a HYSCORE and ENDOR study of a non-natural H-cluster.

作者信息

Adamska-Venkatesh Agnieszka, Simmons Trevor R, Siebel Judith F, Artero Vincent, Fontecave Marc, Reijerse Edward, Lubitz Wolfgang

机构信息

Max-Planck-Institut für Chemische Energiekonversion, Stiftstrasse 34-36, 45470 Mülheim an der Ruhr, Germany.

出版信息

Phys Chem Chem Phys. 2015 Feb 21;17(7):5421-30. doi: 10.1039/c4cp05426a.

Abstract

Hydrogenases are enzymes that catalyze the oxidation of H2 as well as the reduction of protons to form H2. The active site of [FeFe] hydrogenase is referred to as the "H-cluster" and consists of a "classical" [4Fe-4S] cluster connected via a bridging cysteine thiol group to a unique [2Fe]H sub-cluster, containing CN(-) and CO ligands as well as a bidentate azadithiolate ligand. It has been recently shown that the biomimetic Fe2(adt)(CO)4(CN)2 (adt(2-) = azadithiolate) complex resembling the diiron sub-cluster can be inserted in vitro into the apo-protein of [FeFe] hydrogenase, which contains only the [4Fe-4S] part of the H-cluster, resulting in a fully active enzyme. This synthetic tool allows convenient incorporation of a variety of diiron mimics, thus generating hydrogenases with artificial active sites. [FeFe] hydrogenase from Chlamydomonas reinhardtii maturated with the biomimetic complex Fe2(pdt)(CO)4(CN)2 (pdt(2-) = propanedithiolate), in which the bridging adt(2-) ligand is replaced by pdt(2-), can be stabilized in a state strongly resembling the active oxidized (Hox) state of the native protein. This state is EPR active and the signal originates from the mixed valence Fe(I)Fe(II) state of the diiron sub-cluster. Taking advantage of the variant with (15)N and (13)C isotope labeled CN(-) ligands we performed HYSCORE and ENDOR studies on this hybrid protein. The (13)C hyperfine couplings originating from both CN(-) ligands were determined and assigned. Only the (15)N coupling from the CN(-) ligand bound to the terminal iron was observed. Detailed orientation selective ENDOR and HYSCORE experiments at multiple field positions enabled the extraction of accurate data for the relative orientations of the nitrogen and carbon hyperfine tensors. These data are consistent with the crystal structure assuming a g-tensor orientation following the local symmetry of the binuclear sub-cluster.

摘要

氢化酶是一类催化氢气氧化以及质子还原形成氢气的酶。[FeFe]氢化酶的活性位点被称为“H-簇”,它由一个通过桥连半胱氨酸硫醇基团连接到独特的[2Fe]H子簇的“经典”[4Fe-4S]簇组成,该子簇含有氰根(CN⁻)和一氧化碳(CO)配体以及一个双齿氮杂二硫醇盐配体。最近的研究表明,类似于二铁子簇的仿生[Fe₂(adt)(CO)₄(CN)₂]²⁻(adt²⁻ = 氮杂二硫醇盐)配合物能够在体外插入到[FeFe]氢化酶的脱辅基蛋白中,该脱辅基蛋白仅包含H-簇的[4Fe-4S]部分,从而产生一种完全有活性的酶。这种合成工具使得各种二铁模拟物能够方便地掺入,进而生成具有人工活性位点的氢化酶。莱茵衣藻的[FeFe]氢化酶与仿生配合物[Fe₂(pdt)(CO)₄(CN)₂]²⁻(pdt²⁻ = 丙烷二硫醇盐)成熟,其中桥连的adt²⁻配体被pdt²⁻取代,能够稳定在一种与天然蛋白质的活性氧化(Hox)状态非常相似的状态。这种状态具有电子顺磁共振(EPR)活性,信号源自二铁子簇的混合价态Fe(I)Fe(II)状态。利用带有¹⁵N和¹³C同位素标记的氰根配体的变体,我们对这种杂合蛋白进行了高分辨电子自旋回波包络调制(HYSCORE)和电子核双共振(ENDOR)研究。确定并归属了源自两个氰根配体的¹³C超精细耦合。仅观察到与末端铁结合的氰根配体的¹⁵N耦合。在多个场位置进行的详细取向选择性ENDOR和HYSCORE实验能够提取氮和碳超精细张量相对取向的准确数据。这些数据与晶体结构一致,假设g张量取向遵循双核子簇的局部对称性。

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