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从一名贫血肯尼亚婴儿粪便中分离出的柏原双歧杆菌PV20-2的完整组装基因组序列

Complete and Assembled Genome Sequence of Bifidobacterium kashiwanohense PV20-2, Isolated from the Feces of an Anemic Kenyan Infant.

作者信息

Vazquez-Gutierrez Pamela, Lacroix Christophe, Chassard Christophe, Klumpp Jochen, Jans Christoph, Stevens Marc J A

机构信息

Laboratory of Food Biotechnology, Institute of Food, Nutrition and Health, ETH Zürich, Zürich, Switzerland.

Laboratory of Food Biotechnology, Institute of Food, Nutrition and Health, ETH Zürich, Zürich, Switzerland

出版信息

Genome Announc. 2015 Jan 22;3(1):e01467-14. doi: 10.1128/genomeA.01467-14.

Abstract

The complete genome sequence of Bifidobacterium kashiwanohense strain PV20-2, an infant feces isolate, was determined using single-molecule real-time sequencing (SMRT). Hierarchical genome assembly resulted in a completely assembled genome of 2,370,978 bp. The B. kashiwanohense PV20-2 genome is the first completely sequenced and assembled genome of the species.

摘要

使用单分子实时测序(SMRT)技术测定了从婴儿粪便中分离出的柏氏双歧杆菌(Bifidobacterium kashiwanohense)菌株PV20-2的全基因组序列。分层基因组组装得到了一个完整组装的2,370,978碱基对的基因组。柏氏双歧杆菌PV20-2基因组是该物种第一个完全测序和组装的基因组。

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本文引用的文献

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Probiotics tailored to the infant: a window of opportunity.
Curr Opin Biotechnol. 2014 Apr;26:141-7. doi: 10.1016/j.copbio.2013.12.012. Epub 2014 Jan 28.
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.
Nat Methods. 2013 Jun;10(6):563-9. doi: 10.1038/nmeth.2474. Epub 2013 May 5.
4
Complete Genome Sequence of the Probiotic Bifidobacterium thermophilum Strain RBL67.
Genome Announc. 2013 May 2;1(3):e00191-13. doi: 10.1128/genomeA.00191-13.
5
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Int J Syst Evol Microbiol. 2011 Nov;61(Pt 11):2610-2615. doi: 10.1099/ijs.0.024521-0. Epub 2010 Dec 10.
6
The RAST Server: rapid annotations using subsystems technology.
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.

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